RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 UBE2SQ16763 222 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 FANCBQ8NB91 859 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 SLC12A7Q9Y666 1083 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 GSTTP1A0A1W2PQM5 241 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 CAND2O75155 1236 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 ITGB5P18084 799 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 COL9A1P20849 921 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 GIMAP8Q8ND71 665 aaPredicted RBP17.74■□□□□ 0.43
SEC13-213ENST00000445064 LMBR1Q8WVP7 490 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 TOP1MTQ969P6 601 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 GPRASP2Q96D09 838 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 ANO2Q9NQ90 1003 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 PKD2L1Q9P0L9 805 aa17.74■□□□□ 0.43
SEC13-213ENST00000445064 NRCAMQ92823 1304 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.73■□□□□ 0.43
SEC13-213ENST00000445064 KCNA2P16389 499 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 FAM26DQ5JW98 314 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 FBXO22Q8NEZ5 403 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 PCDHA6Q9UN73 950 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 PCDHA8Q9Y5H6 950 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 UBIAD1Q9Y5Z9 338 aa17.73■□□□□ 0.43
SEC13-213ENST00000445064 SPDYE3A6NKU9 549 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 CHRNA1P02708 482 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 MARK3P27448 753 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 MTMR1Q13613 665 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 RUFY4Q6ZNE9 571 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 TMTC3Q6ZXV5 915 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 HEATR3Q7Z4Q2 680 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 MICU3Q86XE3 530 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 SP7Q8TDD2 431 aaPredicted RBP17.72■□□□□ 0.43
SEC13-213ENST00000445064 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 RAPGEFL1Q9UHV5 662 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 MICAL3Q7RTP6 2002 aa17.72■□□□□ 0.43
SEC13-213ENST00000445064 TTC28Q96AY4 2481 aa17.71■□□□□ 0.43
SEC13-213ENST00000445064 SYNE3Q6ZMZ3 975 aa17.71■□□□□ 0.43
SEC13-213ENST00000445064 GLG1Q92896 1179 aa17.71■□□□□ 0.43
SEC13-213ENST00000445064 YME1L1Q96TA2 773 aa17.71■□□□□ 0.43
SEC13-213ENST00000445064 IFIH1Q9BYX4 1025 aaKnown RBP17.71■□□□□ 0.43
SEC13-213ENST00000445064 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
SEC13-213ENST00000445064 SIP14410 1827 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 PPFIA1Q13136 1202 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 EPC2Q52LR7 807 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 SGMS1Q86VZ5 419 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 APBB2Q92870 758 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 TCEANC2Q96MN5 208 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 ERAP1Q9NZ08 941 aa17.7■□□□□ 0.42
SEC13-213ENST00000445064 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
SEC13-213ENST00000445064 MAFGO15525 162 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 GHRP10912 638 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 IGBP1P78318 339 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 GRIK4Q16099 956 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 MARCH8Q5T0T0 291 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 WWC2Q6AWC2 1192 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 RPAINQ86UA6 219 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 DNAJB3Q8WWF6 145 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 SMARCAD1Q9H4L7 1026 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 BRPF3Q9ULD4 1205 aa17.69■□□□□ 0.42
SEC13-213ENST00000445064 XIRP2A4UGR9 3374 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 EXOSC10Q01780 885 aaKnown RBP17.68■□□□□ 0.42
SEC13-213ENST00000445064 MGAT3Q09327 533 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 GPM6BQ13491 265 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 RNF20Q5VTR2 975 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 TYW1BQ6NUM6 668 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 TAF2Q6P1X5 1199 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 APOA5Q6Q788 366 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 RSPH3Q86UC2 560 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 TMEM192Q8IY95 271 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 CYP2W1Q8TAV3 490 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 PGBD1Q96JS3 809 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 SAMD11Q96NU1 681 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 PCYT2Q99447 389 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 MXRA8Q9BRK3 442 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 EPHX3Q9H6B9 360 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 UBE2ZQ9H832 354 aaPredicted RBP17.68■□□□□ 0.42
SEC13-213ENST00000445064 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 TUBE1Q9UJT0 475 aa17.68■□□□□ 0.42
SEC13-213ENST00000445064 V9GY48 417 aaPredicted RBP17.68■□□□□ 0.42
SEC13-213ENST00000445064 KAT6AQ92794 2004 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 H3BNC9 293 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 ENPP3O14638 875 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 ARP10275 920 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 INSRRP14616 1297 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 NAPAP54920 295 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 LPIN1Q14693 890 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 MRPL38Q96DV4 380 aaKnown RBP17.67■□□□□ 0.42
SEC13-213ENST00000445064 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 KCNH7Q9NS40 1196 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
SEC13-213ENST00000445064 CNTNAP5Q8WYK1 1306 aa17.67■□□□□ 0.42
SEC13-213ENST00000445064 MBLAC1A4D2B0 266 aaPredicted RBP17.66■□□□□ 0.42
SEC13-213ENST00000445064 KCNA5P22460 613 aa17.66■□□□□ 0.42
SEC13-213ENST00000445064 FUT2Q10981 343 aa17.66■□□□□ 0.42
SEC13-213ENST00000445064 PTPROQ16827 1216 aa17.66■□□□□ 0.42
SEC13-213ENST00000445064 BMP2KLQ5H9B9 411 aa17.66■□□□□ 0.42
SEC13-213ENST00000445064 DHX32Q7L7V1 743 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms