RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 GSTTP1A0A1W2PQM5 241 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 H0YGN5 161 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 TBX3O15119 743 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 MSH4O15457 936 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 GAS7O60861 476 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 BAG4O95429 457 aaKnown RBP12.26□□□□□ -0.45
HDAC6-211ENST00000443563 TDP2O95551 362 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 CD4P01730 458 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 PDCP20941 246 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 ACTR2P61160 394 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 FAAP100Q0VG06 881 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 KIAA0753Q2KHM9 967 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 UTP14CQ5TAP6 766 aaKnown RBP12.26□□□□□ -0.45
HDAC6-211ENST00000443563 LRCH2Q5VUJ6 765 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 FAM160B1Q5W0V3 765 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 MIS18BP1Q6P0N0 1132 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 SLC5A5Q92911 643 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 LENG9Q96B70 501 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 FAM20AQ96MK3 541 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-211ENST00000443563 C16orf70Q9BSU1 422 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 TEKT3Q9BXF9 490 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 PDLIM7Q9NR12 457 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 ERAP1Q9NZ08 941 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 NOL7Q9UMY1 257 aaKnown RBP12.26□□□□□ -0.45
HDAC6-211ENST00000443563 NOD1Q9Y239 953 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 EMSYQ7Z589 1322 aa12.26□□□□□ -0.45
HDAC6-211ENST00000443563 KIAA0355O15063 1070 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 DHX15O43143 795 aaKnown RBP12.25□□□□□ -0.45
HDAC6-211ENST00000443563 EDIL3O43854 480 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 MARCH6O60337 910 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 B4GALT4O60513 344 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 ATG7O95352 703 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 GNAT1P11488 350 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 RAG1P15918 1043 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 SFNP31947 248 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 SLC26A2P50443 739 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 ORC2Q13416 577 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-211ENST00000443563 LARP1BQ659C4 914 aaKnown RBP12.25□□□□□ -0.45
HDAC6-211ENST00000443563 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 SLFN12Q8IYM2 578 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 GLG1Q92896 1179 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 GTF2IRD1Q9UHL9 959 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-211ENST00000443563 LTBP2Q14767 1821 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 KAT6AQ92794 2004 aa12.25□□□□□ -0.45
HDAC6-211ENST00000443563 C17orf102A2RUQ5 167 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 WDR64B1ANS9 1081 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 DDX39AO00148 427 aaKnown RBP12.24□□□□□ -0.45
HDAC6-211ENST00000443563 BACH1O14867 736 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 LGR5O75473 907 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 PSAPP07602 524 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 SYN1P17600 705 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 U2AF2P26368 475 aaKnown RBP eCLIP12.24□□□□□ -0.45
HDAC6-211ENST00000443563 MYH9P35579 1960 aaKnown RBP12.24□□□□□ -0.45
HDAC6-211ENST00000443563 TRAPPC10P48553 1259 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 JAK3P52333 1124 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 EARS2Q5JPH6 523 aaKnown RBP12.24□□□□□ -0.45
HDAC6-211ENST00000443563 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 RDM1Q8NG50 284 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 ETNPPLQ8TBG4 499 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 TBX21Q9UL17 535 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 SAMM50Q9Y512 469 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 PCDHA10Q9Y5I2 948 aa12.24□□□□□ -0.45
HDAC6-211ENST00000443563 WDR81Q562E7 1941 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 NRCAMQ92823 1304 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 IGKV6D-21A0A0A0MT36 114 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 SLC37A4O43826 429 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 NEMFO60524 1076 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 PSMD10O75832 226 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 CCNE2O96020 404 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 TIMP1P01033 207 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
HDAC6-211ENST00000443563 STAT5BP51692 787 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 BFSP2Q13515 415 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 PTGISQ16647 500 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 TRIM50Q86XT4 487 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 AFAP1L1Q8TED9 768 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
HDAC6-211ENST00000443563 HIPK3Q9H422 1215 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 KCNMB3Q9NPA1 279 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 ZNF302Q9NR11 478 aa12.23□□□□□ -0.45
HDAC6-211ENST00000443563 TRMT13Q9NUP7 481 aaKnown RBP12.23□□□□□ -0.45
HDAC6-211ENST00000443563 FAM205CA6NFA0 338 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 RRN3P2A6NIE6 340 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 SMIM10L2AP0DMW4 78 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 SMIM10L2BP0DMW5 78 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 PDIA4P13667 645 aaKnown RBP12.22□□□□□ -0.45
HDAC6-211ENST00000443563 PTK7Q13308 1070 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 CALCRLQ16602 461 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 GDF6Q6KF10 455 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-211ENST00000443563 SWSAP1Q6NVH7 229 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 MIER3Q7Z3K6 550 aa12.22□□□□□ -0.45
HDAC6-211ENST00000443563 SH3RF1Q7Z6J0 888 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms