RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 CASC1Q6TDU7 716 aa11.68□□□□□ -0.54
HDLBP-219ENST00000442714 FBXO22Q8NEZ5 403 aa11.68□□□□□ -0.54
HDLBP-219ENST00000442714 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-219ENST00000442714 LMBR1Q8WVP7 490 aa11.68□□□□□ -0.54
HDLBP-219ENST00000442714 MRPL38Q96DV4 380 aaKnown RBP11.68□□□□□ -0.54
HDLBP-219ENST00000442714 CDHR1Q96JP9 859 aa11.68□□□□□ -0.54
HDLBP-219ENST00000442714 TMEM87BQ96K49 555 aa11.68□□□□□ -0.54
HDLBP-219ENST00000442714 ZNF215Q9UL58 517 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-219ENST00000442714 TRIP12Q14669 1992 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-219ENST00000442714 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
HDLBP-219ENST00000442714 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 MBLAC1A4D2B0 266 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-219ENST00000442714 CCDC69A6NI79 296 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 SLC27A2O14975 620 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 UPP2O95045 317 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 CTSHP09668 335 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 CALM1P0DP23 149 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 CALM2P0DP24 149 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 CALM3P0DP25 149 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 TCF7P36402 384 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-219ENST00000442714 NFXL1Q6ZNB6 911 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 RUFY4Q6ZNE9 571 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 TMEM192Q8IY95 271 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 APBB2Q92870 758 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.54
HDLBP-219ENST00000442714 IL17RAQ96F46 866 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 UBE2ZQ9H832 354 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-219ENST00000442714 JADE2Q9NQC1 790 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 SEC63Q9UGP8 760 aaKnown RBP11.67□□□□□ -0.54
HDLBP-219ENST00000442714 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 BRWD1Q9NSI6 2320 aa11.67□□□□□ -0.54
HDLBP-219ENST00000442714 PI4K2BG5E9Z4 385 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 RXRAP19793 462 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-219ENST00000442714 EXOSC10Q01780 885 aaKnown RBP11.66□□□□□ -0.54
HDLBP-219ENST00000442714 SP4Q02446 784 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 MGAT3Q09327 533 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 GPM6BQ13491 265 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 CREB3L3Q68CJ9 461 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 TAF2Q6P1X5 1199 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 RTN4RL1Q86UN2 441 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-219ENST00000442714 SGMS1Q86VZ5 419 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 FAM178BQ8IXR5 827 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 CRIPAKQ8N1N5 446 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 CCDC82Q8N4S0 544 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 NEK9Q8TD19 979 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 YME1L1Q96TA2 773 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 PCYT2Q99447 389 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 ESYT1Q9BSJ8 1104 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 LRFN3Q9BTN0 628 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 IFIH1Q9BYX4 1025 aaKnown RBP11.66□□□□□ -0.54
HDLBP-219ENST00000442714 SMARCAD1Q9H4L7 1026 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 ERAP1Q9NZ08 941 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 SLC12A7Q9Y666 1083 aa11.66□□□□□ -0.54
HDLBP-219ENST00000442714 GRXCR2A6NFK2 248 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 GPR37L1O60883 481 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 RB1P06400 928 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 LINC00271P0C7V0 271 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 KCNA5P22460 613 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 BMPR1AP36894 532 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 MTMR1Q13613 665 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 LPIN1Q14693 890 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 GRIK4Q16099 956 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 UBE2SQ16763 222 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 PTPROQ16827 1216 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 BANK1Q8NDB2 785 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 CYP2W1Q8TAV3 490 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 LRRC2Q9BYS8 371 aa11.65□□□□□ -0.54
HDLBP-219ENST00000442714 RRN3P2A6NIE6 340 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 C5orf67F2Z3F1 127 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 INSRRP14616 1297 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 FUT2Q10981 343 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 PPFIA1Q13136 1202 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 TSGA10IPQ3SY00 556 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 FBXO47Q5MNV8 452 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 PLPPR4Q7Z2D5 763 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 RSPH3Q86UC2 560 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 TEX2Q8IWB9 1127 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 GJD3Q8N144 294 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 FIBCD1Q8N539 461 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 DNAJB3Q8WWF6 145 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 GLG1Q92896 1179 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 CLP1Q92989 425 aaKnown RBP11.64□□□□□ -0.55
HDLBP-219ENST00000442714 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-219ENST00000442714 MXRA8Q9BRK3 442 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 AGO3Q9H9G7 860 aaKnown RBP11.64□□□□□ -0.55
HDLBP-219ENST00000442714 C11orf16Q9NQ32 467 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 KCNH7Q9NS40 1196 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-219ENST00000442714 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-219ENST00000442714 KIAA1217Q5T5P2 1943 aa11.64□□□□□ -0.55
HDLBP-219ENST00000442714 GBF1Q92538 1859 aa11.63□□□□□ -0.55
HDLBP-219ENST00000442714 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
HDLBP-219ENST00000442714 SPDYE3A6NKU9 549 aa11.63□□□□□ -0.55
HDLBP-219ENST00000442714 MEIS1O00470 390 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms