RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 NOP56O00567 594 aaKnown RBP16.23■□□□□ 0.19
LINC00642-202ENST00000442515 GALR2O43603 387 aaPredicted RBP16.23■□□□□ 0.19
LINC00642-202ENST00000442515 DHX16O60231 1041 aaKnown RBP16.23■□□□□ 0.19
LINC00642-202ENST00000442515 DGKIO75912 1065 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 TGFB3P10600 412 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 NUBP1P53384 320 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 GHRHRQ02643 423 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 PGM5Q15124 567 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 PTPN21Q16825 1174 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 RBM23Q86U06 439 aaKnown RBP16.23■□□□□ 0.19
LINC00642-202ENST00000442515 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 TBC1D10CQ8IV04 446 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 PNMA1Q8ND90 353 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 SPPL3Q8TCT6 385 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 LMBR1Q8WVP7 490 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 ZKSCAN3Q9BRR0 538 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 BCAS3Q9H6U6 928 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 EHMT1Q9H9B1 1298 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 SUPT16HQ9Y5B9 1047 aaKnown RBP16.23■□□□□ 0.19
LINC00642-202ENST00000442515 PCDHGC5Q9Y5F6 944 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 KIAA1217Q5T5P2 1943 aa16.23■□□□□ 0.19
LINC00642-202ENST00000442515 RIF1Q5UIP0 2472 aaKnown RBP16.23■□□□□ 0.19
LINC00642-202ENST00000442515 ENPP3O14638 875 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
LINC00642-202ENST00000442515 ADAM17P78536 824 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 ARHGAP4P98171 946 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 LPIN1Q14693 890 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 NAALADL2Q58DX5 795 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 KLHL23Q8NBE8 558 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 POF1BQ8WVV4 589 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 SUSD6Q92537 303 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 ZFP91Q96JP5 570 aaPredicted RBP16.22■□□□□ 0.19
LINC00642-202ENST00000442515 USP26Q9BXU7 913 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 JMJD4Q9H9V9 463 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 TRPC6Q9Y210 931 aa16.22■□□□□ 0.19
LINC00642-202ENST00000442515 ZMYM6O95789 1325 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 NEDD4P46934 1319 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
LINC00642-202ENST00000442515 NBL1P41271 181 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 RBM10P98175 930 aaKnown RBP16.21■□□□□ 0.19
LINC00642-202ENST00000442515 MGAT3Q09327 533 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 ASPRV1Q53RT3 343 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 MFSD6Q6ZSS7 791 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 CMTR2Q8IYT2 770 aaKnown RBP16.21■□□□□ 0.19
LINC00642-202ENST00000442515 LINC01599Q8WXQ3 324 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 RIPOR3Q96MK2 946 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
LINC00642-202ENST00000442515 PLXNA3P51805 1871 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 CCND2P30279 289 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 HOXA13P31271 388 aaPredicted RBP16.2■□□□□ 0.18
LINC00642-202ENST00000442515 RUFY4Q6ZNE9 571 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 VN1R2Q8NFZ6 395 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 GPR20Q99678 358 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 HELLSQ9NRZ9 838 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 ZNF215Q9UL58 517 aaPredicted RBP16.2■□□□□ 0.18
LINC00642-202ENST00000442515 ZFHX4Q86UP3 3567 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 FAM186AA6NE01 2351 aa16.2■□□□□ 0.18
LINC00642-202ENST00000442515 DMXL1Q9Y485 3027 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 A0A0D9SFI3 127 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 PER2O15055 1255 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 MX1P20591 662 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
LINC00642-202ENST00000442515 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 TAF2Q6P1X5 1199 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 METTL7BQ6UX53 244 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 ZBTB33Q86T24 672 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 ESR2Q92731 530 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 FAM227BQ96M60 508 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 TLE6Q9H808 572 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 KAT14Q9H8E8 782 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 TELO2Q9Y4R8 837 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 NRCAMQ92823 1304 aa16.19■□□□□ 0.18
LINC00642-202ENST00000442515 PPP1R11O60927 126 aaPredicted RBP16.18■□□□□ 0.18
LINC00642-202ENST00000442515 PARP1P09874 1014 aaKnown RBP16.18■□□□□ 0.18
LINC00642-202ENST00000442515 ID4P47928 161 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 UTP14CQ5TAP6 766 aaKnown RBP16.18■□□□□ 0.18
LINC00642-202ENST00000442515 TSHZ1Q6ZSZ6 1077 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 CYFIP1Q7L576 1253 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 ZNF589Q86UQ0 364 aaPredicted RBP16.18■□□□□ 0.18
LINC00642-202ENST00000442515 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 TMEM105Q8N8V8 129 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 ATP8B4Q8TF62 1192 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 RNF41Q9H4P4 317 aaPredicted RBP16.18■□□□□ 0.18
LINC00642-202ENST00000442515 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
LINC00642-202ENST00000442515 GVINP1Q7Z2Y8 2422 aa16.18■□□□□ 0.18
LINC00642-202ENST00000442515 SP100P23497 879 aaPredicted RBP16.17■□□□□ 0.18
LINC00642-202ENST00000442515 NEDD9Q14511 834 aa16.17■□□□□ 0.18
LINC00642-202ENST00000442515 GNPTABQ3T906 1256 aa16.17■□□□□ 0.18
LINC00642-202ENST00000442515 NPAS4Q8IUM7 802 aa16.17■□□□□ 0.18
LINC00642-202ENST00000442515 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
LINC00642-202ENST00000442515 AGO3Q9H9G7 860 aaKnown RBP16.17■□□□□ 0.18
LINC00642-202ENST00000442515 TRIM6-TRIM34B2RNG4 842 aa16.16■□□□□ 0.18
LINC00642-202ENST00000442515 PPFIA3O75145 1194 aa16.16■□□□□ 0.18
LINC00642-202ENST00000442515 CD52P31358 61 aa16.16■□□□□ 0.18
LINC00642-202ENST00000442515 GATMP50440 423 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms