RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SP4Q02446 784 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 CUL4AQ13619 759 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 ZNF746Q6NUN9 644 aaPredicted RBP17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 GDF15Q99988 308 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 FOXP1Q9H334 677 aaPredicted RBP17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 SMARCAD1Q9H4L7 1026 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 GTF2IRD1Q9UHL9 959 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 TCEAL9Q9UHQ7 104 aa17.04■□□□□ 0.32
CSNK1E-210ENST00000442216 MSH4O15457 936 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 TDP2O95551 362 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 TIMP1P01033 207 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 RAG1P15918 1043 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 BMP8BP34820 402 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 ACTR2P61160 394 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 LETM2Q2VYF4 491 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 SMAP1Q8IYB5 467 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 SLC5A5Q92911 643 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 SNX21Q969T3 373 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 TRPV6Q9H1D0 765 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 ERAP1Q9NZ08 941 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 HDAC6Q9UBN7 1215 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 DDX25Q9UHL0 483 aaKnown RBP17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 TELO2Q9Y4R8 837 aa17.03■□□□□ 0.32
CSNK1E-210ENST00000442216 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 TBX3O15119 743 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 GJB2P29033 226 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 HOXC8P31273 242 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 SLC26A2P50443 739 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 FOSBP53539 338 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 UTP14CQ5TAP6 766 aaKnown RBP17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 ABHD15Q6UXT9 468 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 PLPPR4Q7Z2D5 763 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 FAM20AQ96MK3 541 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 PRO3102Q9H379 93 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 AZI2Q9H6S1 392 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 TRMT13Q9NUP7 481 aaKnown RBP17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
CSNK1E-210ENST00000442216 TANC1Q9C0D5 1861 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 CCNT1O60563 726 aaKnown RBP17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 GAS7O60861 476 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 PSMD10O75832 226 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 CCNE2O96020 404 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 PTGISQ16647 500 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 LRCH2Q5VUJ6 765 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 GDF6Q6KF10 455 aaPredicted RBP17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 ETNPPLQ8TBG4 499 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 AFAP1L1Q8TED9 768 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 GLG1Q92896 1179 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 TEKT3Q9BXF9 490 aa17.01■□□□□ 0.31
CSNK1E-210ENST00000442216 A0A1W2PPC1 479 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 K7ELQ4 463 aaPredicted RBP17■□□□□ 0.31
CSNK1E-210ENST00000442216 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
CSNK1E-210ENST00000442216 SMIM10L2AP0DMW4 78 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 SMIM10L2BP0DMW5 78 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 GNAT1P11488 350 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
CSNK1E-210ENST00000442216 SFNP31947 248 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 STAT5BP51692 787 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 ORC2Q13416 577 aaPredicted RBP17■□□□□ 0.31
CSNK1E-210ENST00000442216 FAM160B1Q5W0V3 765 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 MFSD5Q6N075 450 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 MIS18BP1Q6P0N0 1132 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 TRIM50Q86XT4 487 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 RDM1Q8NG50 284 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 BADQ92934 168 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
CSNK1E-210ENST00000442216 PCYT2Q99447 389 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 NOC4LQ9BVI4 516 aaKnown RBP17■□□□□ 0.31
CSNK1E-210ENST00000442216 HIPK3Q9H422 1215 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 KCNMB3Q9NPA1 279 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 NOD1Q9Y239 953 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 PCDHA10Q9Y5I2 948 aa17■□□□□ 0.31
CSNK1E-210ENST00000442216 NRCAMQ92823 1304 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 C17orf102A2RUQ5 167 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 FAM205CA6NFA0 338 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 WDR64B1ANS9 1081 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 PITPNM1O00562 1244 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 SLC37A4O43826 429 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 PSAPP07602 524 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 ITGB8P26012 769 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 JAK3P52333 1124 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 MDM2Q00987 491 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 RBL2Q08999 1139 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 BFSP2Q13515 415 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 GNL2Q13823 731 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 B3GNT9Q6UX72 402 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 NOSTRINQ8IVI9 506 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 CCDC155Q8N6L0 562 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 CAGE1Q8TC20 777 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms