RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 NRCAMQ92823 1304 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 TRANK1O15050 2925 aa18.63■□□□□ 0.57
SNRPD3-204ENST00000439775 SPTBN5Q9NRC6 3674 aaKnown RBP18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 EPB41L2O43491 1005 aaKnown RBP18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 TLL1O43897 1013 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 CPA1P15085 419 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 IGFBP4P22692 258 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 METAP2P50579 478 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 DEFB103AP81534 67 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 TAP1Q03518 808 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 AP3B2Q13367 1082 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 Q6ZUG5 572 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 MXRA8Q9BRK3 442 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 AGXT2Q9BYV1 514 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 SETD4Q9NVD3 440 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 PTPRSQ13332 1948 aa18.62■□□□□ 0.57
SNRPD3-204ENST00000439775 GSTTP1A0A1W2PQM5 241 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 SMCO2A6NFE2 343 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 GJB5O95377 273 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 POU3F3P20264 500 aaPredicted RBP18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 SREBF1P36956 1147 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 CLK2P49760 499 aaKnown RBP18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 APOBRQ0VD83 1088 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 PFKFB3Q16875 520 aaPredicted RBP18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 PLEKHG4Q58EX7 1191 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 BRF1Q92994 677 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 ANO3Q9BYT9 981 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 JPH1Q9HDC5 661 aaPredicted RBP18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 KCNH7Q9NS40 1196 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 ERAP1Q9NZ08 941 aa18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
SNRPD3-204ENST00000439775 NFASCO94856 1347 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 ESYT2A0FGR8 921 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 ARHGEF15O94989 841 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 ADD1P35611 737 aaKnown RBP18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 ARHGAP4P98171 946 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 CEP55Q53EZ4 464 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 RPAINQ86UA6 219 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 ZBED2Q9BTP6 218 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 SMARCAD1Q9H4L7 1026 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 PKD2L1Q9P0L9 805 aa18.6■□□□□ 0.57
SNRPD3-204ENST00000439775 CTSHP09668 335 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 SCG2P13521 617 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 PSMA5P28066 241 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 PPFIA1Q13136 1202 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 FAM26DQ5JW98 314 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 TAF2Q6P1X5 1199 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 CYP2W1Q8TAV3 490 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 PGBD1Q96JS3 809 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 RAD9AQ99638 391 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 SLC9A2Q9UBY0 812 aa18.59■□□□□ 0.57
SNRPD3-204ENST00000439775 LCHNA4D1U4 455 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 MBLAC1A4D2B0 266 aaPredicted RBP18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 EPOPA6NHQ4 379 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 TJAP1Q5JTD0 557 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 NIPA1Q7RTP0 329 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 TMCO2Q7Z6W1 182 aaPredicted RBP18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 CCDC12Q8WUD4 166 aaPredicted RBP18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 ATXN2LQ8WWM7 1075 aaKnown RBP18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 SYMPKQ92797 1274 aaKnown RBP18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 GLG1Q92896 1179 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 SDF4Q9BRK5 362 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 THEGQ9P2T0 379 aa18.58■□□□□ 0.56
SNRPD3-204ENST00000439775 MEIS1O00470 390 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 GTPBP6O43824 516 aaPredicted RBP18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 AMHP03971 560 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 MARK3P27448 753 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 EVCP57679 992 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 GRIK4Q16099 956 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 MCTP2Q6DN12 878 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 CRYGNQ8WXF5 182 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 ARNTL2Q8WYA1 636 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 SEPT8Q92599 483 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 APBB2Q92870 758 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 ZMYND12Q9H0C1 365 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 CERS4Q9HA82 394 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 AGO4Q9HCK5 861 aaKnown RBP18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 PRDM6Q9NQX0 595 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 TMEM260Q9NX78 707 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 TUBE1Q9UJT0 475 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 MTCH2Q9Y6C9 303 aa18.57■□□□□ 0.56
SNRPD3-204ENST00000439775 PRPF3O43395 683 aaKnown RBP18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 RPLP2P05387 115 aaKnown RBP18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 NEFLP07196 543 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 ARP10275 920 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 ITGB3BPQ13352 177 aaPredicted RBP18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 CCDC85BQ15834 202 aaPredicted RBP18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 PKN1Q16512 942 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 PCYT2Q99447 389 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 AZI2Q9H6S1 392 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 XIRP2A4UGR9 3374 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 REV3LO60673 3130 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 MICAL3Q7RTP6 2002 aa18.56■□□□□ 0.56
SNRPD3-204ENST00000439775 COL4A6Q14031 1691 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 959.2 ms