RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LRRC15Q8TF66 581 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 PAIP2Q9BPZ3 127 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 ATP8A1Q9Y2Q0 1164 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 CLRN2A0PK11 232 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 LGALS16A8MUM7 142 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 PLCG2P16885 1265 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 ABCB4P21439 1286 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 YY1P25490 414 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 KIAA0753Q2KHM9 967 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 CCDC174Q6PII3 467 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 B4GALNT4Q76KP1 1039 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 TBC1D5Q92609 795 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 MTMR8Q96EF0 704 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 RTFDC1Q9BY42 306 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 CELF4Q9BZC1 486 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 SLC40A1Q9NP59 571 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 STRCQ7RTU9 1775 aa10.9□□□□□ -0.67
CDC42SE1-202ENST00000439374 NWD2Q9ULI1 1742 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTECB2RU33 542 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 CFBP00751 764 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 QPCTQ16769 361 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 SBK1Q52WX2 424 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 RBM26Q5T8P6 1007 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 ADGRF4Q8IZF3 695 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 FAM133AQ8N9E0 248 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 SH2D3AQ9BRG2 576 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 VEZTQ9HBM0 779 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 SNX12Q9UMY4 172 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 ATP2B4P23634 1241 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 CCNE1P24864 410 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 RCAN1P53805 252 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 SLC10A5Q5PT55 438 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 IRF2BP1Q8IU81 584 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 FAM114A1Q8IWE2 563 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 EHBP1Q8NDI1 1231 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 SPAG5Q96R06 1193 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 PCDHB13Q9Y5F0 798 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 N4BP2Q86UW6 1770 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 CLIC2O15247 247 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 EZRP15311 586 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 MRPL12P52815 198 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 MAGOHP61326 146 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 FAM47EQ6ZV65 393 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 MICALCLQ6ZW33 695 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 NEDD1Q8NHV4 660 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZKSCAN4Q969J2 545 aaPredicted RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 MAGOHBQ96A72 148 aaKnown RBP10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 MTA3Q9BTC8 594 aa10.89□□□□□ -0.67
CDC42SE1-202ENST00000439374 MYH13Q9UKX3 1938 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 PALM3A6NDB9 673 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZNF233A6NK53 670 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 FOXO6A8MYZ6 492 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 GCOM1H8Y6P7 765 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 PPEF1O14829 653 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 MYZAPP0CAP1 466 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 KRT13P13646 458 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 SEPT2Q15019 361 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 ACCSLQ4AC99 568 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 HAUS3Q68CZ6 603 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 WDR93Q6P2C0 686 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 CCDC51Q96ER9 411 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 LSM14BQ9BX40 385 aaKnown RBP10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 PANK4Q9NVE7 773 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 TCP10L2B9ZVM9 353 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 GOLGA8KD6RF30 607 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTEIP0CG38 1075 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 EPHB4P54760 987 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 POTEEQ6S8J3 1075 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 CREG2Q8IUH2 290 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 IFT20Q8IY31 132 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 ANKRD42Q8N9B4 389 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 SPATA20Q8TB22 786 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 NDST4Q9H3R1 872 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 AKAP11Q9UKA4 1901 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 SORBS3O60504 671 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 PPP1R37O75864 691 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 ELF1P32519 619 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 ZNF211Q13398 564 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 BIRC2Q13490 618 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 TMED8Q6PL24 325 aaPredicted RBP10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 MYCBPAPQ8TBZ2 947 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 CUL5Q93034 780 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 MTMR4Q9NYA4 1195 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 AMACRQ9UHK6 382 aa10.88□□□□□ -0.67
CDC42SE1-202ENST00000439374 SLIT2O94813 1529 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 SPDYE3A6NKU9 549 aa10.87□□□□□ -0.67
CDC42SE1-202ENST00000439374 PSMD14O00487 310 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms