RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 C17orf102A2RUQ5 167 aa23.32■■□□□ 1.32
UBE2F-212ENST00000439338 IQCF3P0C7M6 154 aa23.32■■□□□ 1.32
UBE2F-212ENST00000439338 PTK7Q13308 1070 aa23.32■■□□□ 1.32
UBE2F-212ENST00000439338 DEFB128Q7Z7B8 93 aa23.32■■□□□ 1.32
UBE2F-212ENST00000439338 RPUSD2Q8IZ73 545 aaKnown RBP23.32■■□□□ 1.32
UBE2F-212ENST00000439338 WNT8BQ93098 351 aa23.32■■□□□ 1.32
UBE2F-212ENST00000439338 GTF3C6Q969F1 213 aa23.32■■□□□ 1.32
UBE2F-212ENST00000439338 FGBP02675 491 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 HOXC8P31273 242 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 NPY5RQ15761 445 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 RASIP1Q5U651 963 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 BLIDQ8IZY5 108 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 FAM177A1Q8N128 213 aaPredicted RBP23.31■■□□□ 1.32
UBE2F-212ENST00000439338 DAGLBQ8NCG7 672 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 AFAP1L1Q8TED9 768 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 HERVK_113Q902F9 699 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 UIMC1Q96RL1 719 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 RNPEPQ9H4A4 650 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 KCNJ14Q9UNX9 436 aa23.31■■□□□ 1.32
UBE2F-212ENST00000439338 TET1Q8NFU7 2136 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 DDX39AO00148 427 aaKnown RBP23.3■■□□□ 1.32
UBE2F-212ENST00000439338 RFC2P35250 354 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 ACTR2P61160 394 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 SMAD3P84022 425 aaKnown RBP23.3■■□□□ 1.32
UBE2F-212ENST00000439338 SETQ01105 290 aaPredicted RBP23.3■■□□□ 1.32
UBE2F-212ENST00000439338 RBL2Q08999 1139 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 TRIM71Q2Q1W2 868 aaKnown RBP23.3■■□□□ 1.32
UBE2F-212ENST00000439338 Q7L0L9 218 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 LRRC8DQ7L1W4 858 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 OTOP2Q7RTS6 562 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 GLG1Q92896 1179 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 ATP6V0A1Q93050 837 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 ORC3Q9UBD5 711 aaPredicted RBP23.3■■□□□ 1.32
UBE2F-212ENST00000439338 EMSYQ7Z589 1322 aa23.3■■□□□ 1.32
UBE2F-212ENST00000439338 M0R2N6 131 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 TREHO43280 583 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 EDIL3O43854 480 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 LGR5O75473 907 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 PFKMP08237 780 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 CKBP12277 381 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 SELPP16109 830 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 MARK3P27448 753 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 CIITAP33076 1130 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 PRR16Q569H4 304 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 GALNT17Q6IS24 598 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 SERINC5Q86VE9 423 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 PCYT2Q99447 389 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 C22orf23Q9BZE7 217 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 SMARCAD1Q9H4L7 1026 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 SETD4Q9NVD3 440 aa23.29■■□□□ 1.32
UBE2F-212ENST00000439338 CXXC1Q9P0U4 656 aaPredicted RBP23.29■■□□□ 1.32
UBE2F-212ENST00000439338 FAM109BQ6ICB4 259 aaPredicted RBP23.28■■□□□ 1.32
UBE2F-212ENST00000439338 DEFB123Q8N688 67 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 TBCKQ8TEA7 893 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 LMBR1Q8WVP7 490 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 KIF2CQ99661 725 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 ZNF577Q9BSK1 485 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 PHF20Q9BVI0 1012 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 MTIF3Q9H2K0 278 aaKnown RBP23.28■■□□□ 1.32
UBE2F-212ENST00000439338 GJB4Q9NTQ9 266 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 ERAP1Q9NZ08 941 aa23.28■■□□□ 1.32
UBE2F-212ENST00000439338 IPO5O00410 1097 aaKnown RBP23.27■■□□□ 1.32
UBE2F-212ENST00000439338 DHX15O43143 795 aaKnown RBP23.27■■□□□ 1.32
UBE2F-212ENST00000439338 CCNE2O96020 404 aa23.27■■□□□ 1.32
UBE2F-212ENST00000439338 GNAT1P11488 350 aa23.27■■□□□ 1.32
UBE2F-212ENST00000439338 XBP1P17861 261 aa23.27■■□□□ 1.32
UBE2F-212ENST00000439338 ST3GAL1Q11201 340 aa23.27■■□□□ 1.32
UBE2F-212ENST00000439338 NSUN7Q8NE18 718 aaKnown RBP23.27■■□□□ 1.32
UBE2F-212ENST00000439338 LENG9Q96B70 501 aa23.27■■□□□ 1.32
UBE2F-212ENST00000439338 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.26■■□□□ 1.31
UBE2F-212ENST00000439338 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.26■■□□□ 1.31
UBE2F-212ENST00000439338 FDPSP14324 419 aaKnown RBP23.26■■□□□ 1.31
UBE2F-212ENST00000439338 USP11P51784 963 aa23.26■■□□□ 1.31
UBE2F-212ENST00000439338 PPFIA1Q13136 1202 aa23.26■■□□□ 1.31
UBE2F-212ENST00000439338 ZNF618Q5T7W0 954 aa23.26■■□□□ 1.31
UBE2F-212ENST00000439338 TRAF7Q6Q0C0 670 aa23.26■■□□□ 1.31
UBE2F-212ENST00000439338 WASF1Q92558 559 aa23.26■■□□□ 1.31
UBE2F-212ENST00000439338 FTOQ9C0B1 505 aaKnown RBP eCLIP23.26■■□□□ 1.31
UBE2F-212ENST00000439338 AZI2Q9H6S1 392 aa23.26■■□□□ 1.31
UBE2F-212ENST00000439338 ZBBXA8MT70 800 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 GRXCR1A8MXD5 290 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 JAK2O60674 1132 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 THPOP40225 353 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 RBM25P49756 843 aaKnown RBP23.25■■□□□ 1.31
UBE2F-212ENST00000439338 ADAM17P78536 824 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 GPNMBQ14956 572 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 LIMCH1Q9UPQ0 1083 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 NRCAMQ92823 1304 aa23.25■■□□□ 1.31
UBE2F-212ENST00000439338 NBNO60934 754 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 ATG7O95352 703 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 NONOQ15233 471 aaKnown RBP eCLIP23.24■■□□□ 1.31
UBE2F-212ENST00000439338 GRIK4Q16099 956 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 ZNF697Q5TEC3 545 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 ABHD15Q6UXT9 468 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 KRT25Q7Z3Z0 450 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 TBC1D22BQ9NU19 505 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 GBF1Q92538 1859 aa23.24■■□□□ 1.31
UBE2F-212ENST00000439338 RBAK-RBAKDNI3L0D1 243 aa23.23■■□□□ 1.31
UBE2F-212ENST00000439338 PARNO95453 639 aaKnown RBP23.23■■□□□ 1.31
UBE2F-212ENST00000439338 TDP2O95551 362 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms