RNA–Protein interactions for RNA: ENST00000438356.1

RBM33-208, Transcript of RNA binding motif protein 33, human

TSL 4

Gene RBM33, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM33-208	ENST00000438356	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	PRDM12	Q9H4Q4	367 aa		13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	BCAS3	Q9H6U6	928 aa		13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	JADE2	Q9NQC1	790 aa		13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	PRDM6	Q9NQX0	595 aa		13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	TMEM260	Q9NX78	707 aa		13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	PCDHA4	Q9UN74	947 aa		13.73	□□□□□ -0.21
RBM33-208	ENST00000438356	PPFIA4	O75335	1185 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	SUPT20HL2	P0C7V6	817 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	MCM2	P49736	904 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	CLK2	P49760	499 aa	Known RBP	13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	ARHGAP4	P98171	946 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	SP2	Q02086	613 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	ADGRE1	Q14246	886 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	HIC1	Q14526	733 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	CEP55	Q53EZ4	464 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	MYSM1	Q5VVJ2	828 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	CYFIP1	Q7L576	1253 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	BLID	Q8IZY5	108 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	WNT8B	Q93098	351 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	MXRA8	Q9BRK3	442 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	SDF4	Q9BRK5	362 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	ALG1	Q9BT22	464 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	TCEAL9	Q9UHQ7	104 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	NOD1	Q9Y239	953 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	TELO2	Q9Y4R8	837 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	UBIAD1	Q9Y5Z9	338 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	TET1	Q8NFU7	2136 aa		13.72	□□□□□ -0.21
RBM33-208	ENST00000438356	IQCF3	P0C7M6	154 aa		13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	ZNF200	P98182	395 aa	Predicted RBP	13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	SP4	Q02446	784 aa		13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	PTGIS	Q16647	500 aa		13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	HSDL1	Q3SXM5	330 aa		13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	PKD2L1	Q9P0L9	805 aa		13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	HDAC6	Q9UBN7	1215 aa		13.71	□□□□□ -0.21
RBM33-208	ENST00000438356	MYO9B	Q13459	2157 aa		13.71	□□□□□ -0.22
RBM33-208	ENST00000438356	CCDC194	A0A1B0GVG4	234 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	ARHGEF15	O94989	841 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	ITGB5	P18084	799 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	PSEN2	P49810	448 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	HMGN5	P82970	282 aa	Known RBP	13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	SET	Q01105	290 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	GPNMB	Q14956	572 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	SAFB	Q15424	915 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	TCTN1	Q2MV58	587 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	NIPA1	Q7RTP0	329 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	KRT25	Q7Z3Z0	450 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	PLA2G4D	Q86XP0	818 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	CCDC83	Q8IWF9	413 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	C7orf31	Q8N865	590 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	FAM184A	Q8NB25	1140 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	DAGLB	Q8NCG7	672 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	RASGRP4	Q8TDF6	673 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	PPM1E	Q8WY54	764 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	TBC1D32	Q96NH3	1257 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	KIF2C	Q99661	725 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	LLPH	Q9BRT6	129 aa	Known RBP	13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	BACH2	Q9BYV9	841 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	KCNH7	Q9NS40	1196 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	ZNF215	Q9UL58	517 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	KIF3A	Q9Y496	699 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	SLC4A7	Q9Y6M7	1214 aa		13.7	□□□□□ -0.22
RBM33-208	ENST00000438356	CHD9	Q3L8U1	2897 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	LARGE1	O95461	756 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	F2	P00734	622 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	CYP3A4	P08684	503 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	ATP2A2	P16615	1042 aa	Known RBP	13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	USP11	P51784	963 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	PTPN11	Q06124	597 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	SEMA3F	Q13275	785 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	MFSD10	Q14728	455 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	NONO	Q15233	471 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	4e-7	■■□□□ 12.5
RBM33-208	ENST00000438356	RAB30	Q15771	203 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	KIAA0753	Q2KHM9	967 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	SPRED2	Q7Z698	418 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	SESTD1	Q86VW0	696 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	RPUSD2	Q8IZ73	545 aa	Known RBP	13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	NSUN7	Q8NE18	718 aa	Known RBP	13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	AIFM3	Q96NN9	605 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	MTIF3	Q9H2K0	278 aa	Known RBP	13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	JPH1	Q9HDC5	661 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	GTF2IRD1	Q9UHL9	959 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	MSRA	Q9UJ68	235 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	KCNJ14	Q9UNX9	436 aa		13.69	□□□□□ -0.22
RBM33-208	ENST00000438356	HAS3	O00219	553 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	MEIS1	O00470	390 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	CTDNEP1	O95476	244 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	KCNA2	P16389	499 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	KRT2	P35908	639 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	PRR16	Q569H4	304 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	UTP14C	Q5TAP6	766 aa	Known RBP	13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	RETREG2	Q8NC44	543 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	TBCK	Q8TEA7	893 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	SEPT1	Q8WYJ6	367 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	TNPO1	Q92973	898 aa	Known RBP	13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	AZI2	Q9H6S1	392 aa		13.68	□□□□□ -0.22
RBM33-208	ENST00000438356	CERS4	Q9HA82	394 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms