RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 AZI2Q9H6S1 392 aa18.56■□□□□ 0.56
CTSD-205ENST00000438213 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
CTSD-205ENST00000438213 HDAC6Q9UBN7 1215 aa18.56■□□□□ 0.56
CTSD-205ENST00000438213 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.56■□□□□ 0.56
CTSD-205ENST00000438213 BTBD18B2RXH4 712 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 DHX15O43143 795 aaKnown RBP18.55■□□□□ 0.56
CTSD-205ENST00000438213 EDIL3O43854 480 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 ACTR2P61160 394 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 NR5A1Q13285 461 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 PTGISQ16647 500 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 LETM2Q2VYF4 491 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 FBXO18Q8NFZ0 1043 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 BADQ92934 168 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
CTSD-205ENST00000438213 RIT2Q99578 217 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 UBE2OQ9C0C9 1292 aaKnown RBP18.55■□□□□ 0.56
CTSD-205ENST00000438213 GTF2IRD1Q9UHL9 959 aa18.55■□□□□ 0.56
CTSD-205ENST00000438213 COLQQ9Y215 455 aaPredicted RBP18.55■□□□□ 0.56
CTSD-205ENST00000438213 DDX39AO00148 427 aaKnown RBP18.54■□□□□ 0.56
CTSD-205ENST00000438213 ATG7O95352 703 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 GNAT1P11488 350 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 KRT76Q01546 638 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 GUCY1B3Q02153 619 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 PPP4R3AQ6IN85 833 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 ZNF746Q6NUN9 644 aaPredicted RBP18.54■□□□□ 0.56
CTSD-205ENST00000438213 PPP1R13LQ8WUF5 828 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 LENG9Q96B70 501 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 MBOAT7Q96N66 472 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 HIPK3Q9H422 1215 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 ERAP1Q9NZ08 941 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 DDX25Q9UHL0 483 aaKnown RBP18.54■□□□□ 0.56
CTSD-205ENST00000438213 TELO2Q9Y4R8 837 aa18.54■□□□□ 0.56
CTSD-205ENST00000438213 MSH4O15457 936 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 CCNT1O60563 726 aaKnown RBP18.53■□□□□ 0.56
CTSD-205ENST00000438213 GAS7O60861 476 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 LGR5O75473 907 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 TDP2O95551 362 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 STAT5BP51692 787 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 GNL2Q13823 731 aaKnown RBP18.53■□□□□ 0.56
CTSD-205ENST00000438213 GDF6Q6KF10 455 aaPredicted RBP18.53■□□□□ 0.56
CTSD-205ENST00000438213 MFSD5Q6N075 450 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 PLPPR4Q7Z2D5 763 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
CTSD-205ENST00000438213 TMEM199Q8N511 208 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 SLC5A5Q92911 643 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 TNFRSF25Q93038 417 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 UIMC1Q96RL1 719 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
CTSD-205ENST00000438213 EMSYQ7Z589 1322 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 C17orf102A2RUQ5 167 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 BACH1O14867 736 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 MARCH6O60337 910 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 SMIM10L2AP0DMW4 78 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 SMIM10L2BP0DMW5 78 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 CYP2C9P11712 490 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 ITGB8P26012 769 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 BFSP2Q13515 415 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 LRCH2Q5VUJ6 765 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 FAM160B1Q5W0V3 765 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 ABHD15Q6UXT9 468 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 TRIM50Q86XT4 487 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 CCDC155Q8N6L0 562 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 RETREG2Q8NC44 543 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 FAM20AQ96MK3 541 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 NOC4LQ9BVI4 516 aaKnown RBP18.52■□□□□ 0.56
CTSD-205ENST00000438213 TEKT3Q9BXF9 490 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 PPP1R12CQ9BZL4 782 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 FOXP1Q9H334 677 aaPredicted RBP18.52■□□□□ 0.56
CTSD-205ENST00000438213 RNPEPQ9H4A4 650 aa18.52■□□□□ 0.56
CTSD-205ENST00000438213 A0A1W2PPC1 479 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
CTSD-205ENST00000438213 CCNE2O96020 404 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 PSAPP07602 524 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 CYP2C18P33260 490 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 SLC26A2P50443 739 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 FPGSQ05932 587 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 EARS2Q5JPH6 523 aaKnown RBP18.51■□□□□ 0.55
CTSD-205ENST00000438213 PRO3102Q9H379 93 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 SAMM50Q9Y512 469 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 PCDHA10Q9Y5I2 948 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 DOCK5Q9H7D0 1870 aa18.51■□□□□ 0.55
CTSD-205ENST00000438213 NRCAMQ92823 1304 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 IGKV6D-21A0A0A0MT36 114 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 TBX3O15119 743 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 GJB2P29033 226 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 SFNP31947 248 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 PTK7Q13308 1070 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 PPIGQ13427 754 aaKnown RBP eCLIP18.5■□□□□ 0.55
CTSD-205ENST00000438213 SWSAP1Q6NVH7 229 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 CAGE1Q8TC20 777 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 ATP6V0A1Q93050 837 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 PCYT2Q99447 389 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 ZNF302Q9NR11 478 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 SETD4Q9NVD3 440 aa18.5■□□□□ 0.55
CTSD-205ENST00000438213 RRN3P2A6NIE6 340 aa18.49■□□□□ 0.55
CTSD-205ENST00000438213 WDR64B1ANS9 1081 aa18.49■□□□□ 0.55
CTSD-205ENST00000438213 PITPNM1O00562 1244 aa18.49■□□□□ 0.55
CTSD-205ENST00000438213 PSMD10O75832 226 aa18.49■□□□□ 0.55
CTSD-205ENST00000438213 MARK3P27448 753 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms