RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 PTK7Q13308 1070 aa20.25■□□□□ 0.83
NCSTN-208ENST00000438008 HIC1Q14526 733 aa20.25■□□□□ 0.83
NCSTN-208ENST00000438008 TMEM240Q5SV17 173 aa20.25■□□□□ 0.83
NCSTN-208ENST00000438008 TRIM50Q86XT4 487 aa20.25■□□□□ 0.83
NCSTN-208ENST00000438008 CCDC155Q8N6L0 562 aa20.25■□□□□ 0.83
NCSTN-208ENST00000438008 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.25■□□□□ 0.83
NCSTN-208ENST00000438008 UPF2Q9HAU5 1272 aaKnown RBP20.25■□□□□ 0.83
NCSTN-208ENST00000438008 C17orf102A2RUQ5 167 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 IPO5O00410 1097 aaKnown RBP20.24■□□□□ 0.83
NCSTN-208ENST00000438008 DHX15O43143 795 aaKnown RBP20.24■□□□□ 0.83
NCSTN-208ENST00000438008 LGR5O75473 907 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 ATG7O95352 703 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 ACTR2P61160 394 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 RABEP1Q15276 862 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 GPR153Q6NV75 609 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 PSRC1Q6PGN9 363 aaPredicted RBP20.24■□□□□ 0.83
NCSTN-208ENST00000438008 RPUSD2Q8IZ73 545 aaKnown RBP20.24■□□□□ 0.83
NCSTN-208ENST00000438008 RETREG2Q8NC44 543 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 TBCKQ8TEA7 893 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 DHX38Q92620 1227 aaKnown RBP20.24■□□□□ 0.83
NCSTN-208ENST00000438008 LENG9Q96B70 501 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 ZSCAN31Q96LW9 406 aaPredicted RBP20.24■□□□□ 0.83
NCSTN-208ENST00000438008 RNPEPQ9H4A4 650 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 SMARCAD1Q9H4L7 1026 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 ERAP1Q9NZ08 941 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 EMSYQ7Z589 1322 aa20.24■□□□□ 0.83
NCSTN-208ENST00000438008 DTNBO60941 627 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 IQCF3P0C7M6 154 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 RFC2P35250 354 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 ZNF200P98182 395 aaPredicted RBP20.23■□□□□ 0.83
NCSTN-208ENST00000438008 PRR16Q569H4 304 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 KRT25Q7Z3Z0 450 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 AFAP1L1Q8TED9 768 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 VWCEQ96DN2 955 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 SCLYQ96I15 445 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 RNPC3Q96LT9 517 aaKnown RBP20.23■□□□□ 0.83
NCSTN-208ENST00000438008 PCYT2Q99447 389 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 ZNF577Q9BSK1 485 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 GJB4Q9NTQ9 266 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 TBC1D22BQ9NU19 505 aa20.23■□□□□ 0.83
NCSTN-208ENST00000438008 DOCK5Q9H7D0 1870 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 CYP3A7-CYP3A51PA0A087WV96 503 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 JAK2O60674 1132 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 SLC34A2O95436 690 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 PFKMP08237 780 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 ACRP10323 421 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 GNAT1P11488 350 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 CYP3A7P24462 503 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 NONOQ15233 471 aaKnown RBP eCLIP20.22■□□□□ 0.83
NCSTN-208ENST00000438008 TRIM71Q2Q1W2 868 aaKnown RBP20.22■□□□□ 0.83
NCSTN-208ENST00000438008 RASIP1Q5U651 963 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 MOXD1Q6UVY6 613 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 ZNF365Q70YC5 407 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 SERINC5Q86VE9 423 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 LRCH3Q96II8 777 aa20.22■□□□□ 0.83
NCSTN-208ENST00000438008 LLPHQ9BRT6 129 aaKnown RBP20.22■□□□□ 0.83
NCSTN-208ENST00000438008 SH2B1Q9NRF2 756 aaPredicted RBP20.22■□□□□ 0.83
NCSTN-208ENST00000438008 IGKV6D-21A0A0A0MT36 114 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 CCNE2O96020 404 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 SELPP16109 830 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 ADAM17P78536 824 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 Q4G0T1 1027 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 PLPPR4Q7Z2D5 763 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 HERVK_113Q902F9 699 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 GLG1Q92896 1179 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 ATP6V0A1Q93050 837 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 MBOAT7Q96N66 472 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 AZI2Q9H6S1 392 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 SETD4Q9NVD3 440 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 NRCAMQ92823 1304 aa20.21■□□□□ 0.83
NCSTN-208ENST00000438008 PARNO95453 639 aaKnown RBP20.2■□□□□ 0.82
NCSTN-208ENST00000438008 FGBP02675 491 aa20.2■□□□□ 0.82
NCSTN-208ENST00000438008 CKBP12277 381 aa20.2■□□□□ 0.82
NCSTN-208ENST00000438008 ZNF746Q6NUN9 644 aaPredicted RBP20.2■□□□□ 0.82
NCSTN-208ENST00000438008 ABHD15Q6UXT9 468 aa20.2■□□□□ 0.82
NCSTN-208ENST00000438008 WNT8BQ93098 351 aa20.2■□□□□ 0.82
NCSTN-208ENST00000438008 TBC1D32Q96NH3 1257 aa20.2■□□□□ 0.82
NCSTN-208ENST00000438008 LAMA3Q16787 3333 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 CCDC194A0A1B0GVG4 234 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 DDX39AO00148 427 aaKnown RBP20.19■□□□□ 0.82
NCSTN-208ENST00000438008 MSH4O15457 936 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 TREHO43280 583 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 SLC26A2P50443 739 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 STAT5BP51692 787 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 SMAD3P84022 425 aaKnown RBP20.19■□□□□ 0.82
NCSTN-208ENST00000438008 KRT76Q01546 638 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 LRRC8DQ7L1W4 858 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 CCDC83Q8IWF9 413 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 OXER1Q8TDS5 423 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 LMBR1Q8WVP7 490 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 RIT2Q99578 217 aa20.19■□□□□ 0.82
NCSTN-208ENST00000438008 ST18O60284 1047 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 CAND2O75155 1236 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 MARK3P27448 753 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 KRT2P35908 639 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 PPFIA1Q13136 1202 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 GPNMBQ14956 572 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 INF2Q27J81 1249 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 MIS18BP1Q6P0N0 1132 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms