RNA–Protein interactions for RNA: ENST00000436493.2

SDHAP3-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene SDHAP3, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-201ENST00000436493 KRT25Q7Z3Z0 450 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 NSUN7Q8NE18 718 aaKnown RBP24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 CAGE1Q8TC20 777 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 TBCKQ8TEA7 893 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 SCLYQ96I15 445 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 ZSCAN31Q96LW9 406 aaPredicted RBP24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.4■■□□□ 1.53e-13■□□□□ 8.5
SDHAP3-201ENST00000436493 ZNF577Q9BSK1 485 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 PHF20Q9BVI0 1012 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 SMARCAD1Q9H4L7 1026 aa24.4■■□□□ 1.5
SDHAP3-201ENST00000436493 DDX39AO00148 427 aaKnown RBP24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 IPO5O00410 1097 aaKnown RBP24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 GNAT1P11488 350 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 ACTR2P61160 394 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 PTK7Q13308 1070 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 RABEP1Q15276 862 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 ZNF365Q70YC5 407 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 C16orf59Q7L2K0 433 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 LRCH3Q96II8 777 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 AZI2Q9H6S1 392 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 TBC1D22BQ9NU19 505 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 ERAP1Q9NZ08 941 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 TCEAL9Q9UHQ7 104 aa24.39■■□□□ 1.49
SDHAP3-201ENST00000436493 FGBP02675 491 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 FDPSP14324 419 aaKnown RBP24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 ZNF200P98182 395 aaPredicted RBP24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 NONOQ15233 471 aaKnown RBP eCLIP24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 NPY5RQ15761 445 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 TMEM240Q5SV17 173 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 AFAP1L1Q8TED9 768 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 ATP6V0A1Q93050 837 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 CTAGE1Q96RT6 745 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 RNPEPQ9H4A4 650 aa24.38■■□□□ 1.49
SDHAP3-201ENST00000436493 CCDC194A0A1B0GVG4 234 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 M0R2N6 131 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 IQCF3P0C7M6 154 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 RFC2P35250 354 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 CCDC83Q8IWF9 413 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 UIMC1Q96RL1 719 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 MTIF3Q9H2K0 278 aaKnown RBP24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 BRMS1Q9HCU9 246 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 GJB4Q9NTQ9 266 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 SETD4Q9NVD3 440 aa24.37■■□□□ 1.49
SDHAP3-201ENST00000436493 EMSYQ7Z589 1322 aa24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 JAK2O60674 1132 aa24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 LGR5O75473 907 aa24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 MARK3P27448 753 aa24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 TRIM29Q14134 588 aa24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 DHX38Q92620 1227 aaKnown RBP24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 SH2B1Q9NRF2 756 aaPredicted RBP24.36■■□□□ 1.49
SDHAP3-201ENST00000436493 DHX15O43143 795 aaKnown RBP24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 ST18O60284 1047 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 PFKMP08237 780 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 SELPP16109 830 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 HIC1Q14526 733 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 DEFB128Q7Z7B8 93 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 SERINC5Q86VE9 423 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 IL27Q8NEV9 243 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 TNPO1Q92973 898 aaKnown RBP24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 LLPHQ9BRT6 129 aaKnown RBP24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 GTF3C3Q9Y5Q9 886 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 NRCAMQ92823 1304 aa24.35■■□□□ 1.49
SDHAP3-201ENST00000436493 TRIP12Q14669 1992 aaPredicted RBP24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 BACH1O14867 736 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 TREHO43280 583 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 ATG7O95352 703 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 CCNE2O96020 404 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 CKBP12277 381 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 HOXC8P31273 242 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 STAT5BP51692 787 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 RBL2Q08999 1139 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 INF2Q27J81 1249 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 FAM160B1Q5W0V3 765 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 MIS18BP1Q6P0N0 1132 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 LRRC8DQ7L1W4 858 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 LENG9Q96B70 501 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 PCYT2Q99447 389 aa24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 FTOQ9C0B1 505 aaKnown RBP eCLIP24.34■■□□□ 1.49
SDHAP3-201ENST00000436493 EDIL3O43854 480 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 PARNO95453 639 aaKnown RBP24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 KRT2P35908 639 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 KRT76Q01546 638 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 ST3GAL1Q11201 340 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 PPFIA1Q13136 1202 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 Q4G0T1 1027 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 ZNF746Q6NUN9 644 aaPredicted RBP24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 GPR153Q6NV75 609 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 OTOP2Q7RTS6 562 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 PLPPR4Q7Z2D5 763 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 LMBR1Q8WVP7 490 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 HERVK_113Q902F9 699 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 TRPC6Q9Y210 931 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 KAT6AQ92794 2004 aa24.33■■□□□ 1.49
SDHAP3-201ENST00000436493 CYP3A7-CYP3A51PA0A087WV96 503 aa24.32■■□□□ 1.48
SDHAP3-201ENST00000436493 MSH4O15457 936 aa24.32■■□□□ 1.48
SDHAP3-201ENST00000436493 TDP2O95551 362 aa24.32■■□□□ 1.48
SDHAP3-201ENST00000436493 ACTN1P12814 892 aa24.32■■□□□ 1.48
SDHAP3-201ENST00000436493 CYP3A7P24462 503 aa24.32■■□□□ 1.48
SDHAP3-201ENST00000436493 THPOP40225 353 aa24.32■■□□□ 1.48
SDHAP3-201ENST00000436493 FOSBP53539 338 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms