RNA–Protein interactions for RNA: ENST00000435777.2

COL22A1-203, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene COL22A1, Length 4,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-203ENST00000435777 STRN3Q13033 797 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 TRPC5Q9UL62 973 aaPredicted RBP13.78□□□□□ -0.2
COL22A1-203ENST00000435777 PACSIN2Q9UNF0 486 aaPredicted RBP13.78□□□□□ -0.2
COL22A1-203ENST00000435777 VGLL3A8MV65 326 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
COL22A1-203ENST00000435777 PICK1Q9NRD5 415 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 FAM205AQ6ZU69 1335 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 FER1L4A9Z1Z3 1794 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 RGS16O15492 202 aaPredicted RBP13.78□□□□□ -0.2
COL22A1-203ENST00000435777 LMNB1P20700 586 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 BMP6P22004 513 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 GGCXP38435 758 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 NACC1Q96RE7 527 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
COL22A1-203ENST00000435777 COL5A2P05997 1499 aaPredicted RBP13.77□□□□□ -0.2
COL22A1-203ENST00000435777 RAD17O75943 681 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 H2AFXP16104 143 aaPredicted RBP13.77□□□□□ -0.2
COL22A1-203ENST00000435777 PRR5LQ6MZQ0 368 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 MIGA2Q7L4E1 593 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 IWS1Q96ST2 819 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 NKIRAS1Q9NYS0 192 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.2
COL22A1-203ENST00000435777 NNTQ13423 1086 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 LIN9Q5TKA1 542 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 TMEM179Q6ZVK1 233 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 NIM1KQ8IY84 436 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 TBC1D16Q8TBP0 767 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 MGARPQ8TDB4 240 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 CNKSR1Q969H4 720 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 NPHP3-ACAD11A0A0J9YXS1 232 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 F5H6K3 240 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 KLRC3Q07444 240 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 MAGOHBQ96A72 148 aaKnown RBP13.77□□□□□ -0.21
COL22A1-203ENST00000435777 CEP63Q96MT8 703 aa13.77□□□□□ -0.21
COL22A1-203ENST00000435777 NPR1P16066 1061 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
COL22A1-203ENST00000435777 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 WDR11Q9BZH6 1224 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 CAPN7Q9Y6W3 813 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 PDHBP11177 359 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 EZRP15311 586 aaKnown RBP13.76□□□□□ -0.21
COL22A1-203ENST00000435777 ARHGAP25P42331 645 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 ZRSR2Q15696 482 aaKnown RBP13.76□□□□□ -0.21
COL22A1-203ENST00000435777 EMBQ6PCB8 327 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 TRIM65Q6PJ69 517 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 SPATA4Q8NEY3 305 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 ATP8A1Q9Y2Q0 1164 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 NR3C1P04150 777 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 APBA1Q02410 837 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 ZNF543Q08ER8 600 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 AP3B2Q13367 1082 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 ORC2Q13416 577 aaPredicted RBP13.76□□□□□ -0.21
COL22A1-203ENST00000435777 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 CDKAL1Q5VV42 579 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 C16orf86Q6ZW13 317 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 MXD3Q9BW11 206 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 DKC1O60832 514 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL22A1-203ENST00000435777 PDXDC2PQ6P474 469 aa13.76□□□□□ -0.21
COL22A1-203ENST00000435777 RIC1Q4ADV7 1423 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PLTPP55058 493 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 SEMA3FQ13275 785 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PDIA5Q14554 519 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 UBE2TQ9NPD8 197 aaPredicted RBP13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PTPN22Q9Y2R2 807 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 NRXN3Q9Y4C0 1643 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 AKAP12Q02952 1782 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PLA2G4AP47712 749 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PPP2R5EQ16537 467 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 PDXDC1Q6P996 788 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 CNKSR2Q8WXI2 1034 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 IQCGQ9H095 443 aaKnown RBP13.75□□□□□ -0.21
COL22A1-203ENST00000435777 SMARCAL1Q9NZC9 954 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 SNX12Q9UMY4 172 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 BCL9O00512 1426 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 DCCP43146 1447 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 GAS8O95995 478 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 VEGFAP15692 232 aaPredicted RBP13.75□□□□□ -0.21
COL22A1-203ENST00000435777 DHX9Q08211 1270 aaKnown RBP13.75□□□□□ -0.21
COL22A1-203ENST00000435777 RC3H1Q5TC82 1133 aaKnown RBP13.75□□□□□ -0.21
COL22A1-203ENST00000435777 ANKRD42Q8N9B4 389 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 POMGNT1Q8WZA1 660 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 LRRC1Q9BTT6 524 aa13.75□□□□□ -0.21
COL22A1-203ENST00000435777 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 CD19P15391 556 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 KNOP1Q1ED39 458 aaKnown RBP13.74□□□□□ -0.21
COL22A1-203ENST00000435777 PPP1R18Q6NYC8 613 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 FLAD1Q8NFF5 587 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 DCAF4Q8WV16 495 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
COL22A1-203ENST00000435777 PBKQ96KB5 322 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 AGTPBP1Q9UPW5 1226 aa13.74□□□□□ -0.21
COL22A1-203ENST00000435777 FHOD1Q9Y613 1164 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms