RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 PCF11O94913 1555 aaKnown RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 ST8SIA6P61647 398 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 APBA1Q02410 837 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 OR6B3Q8NGW1 331 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 ZMYM6O95789 1325 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 ZBED1O96006 694 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 HSPD1P10809 573 aaKnown RBP12.05□□□□□ -0.48
SCN4A-201ENST00000435607 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 ASXL2Q76L83 1435 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 CUL1Q13616 776 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 SGO2Q562F6 1265 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 TTLL6Q8N841 843 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 FANCBQ8NB91 859 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 INPP5FQ9Y2H2 1132 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
SCN4A-201ENST00000435607 RPN1P04843 607 aaKnown RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 GYG1P46976 350 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 TMCO5AQ8N6Q1 288 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 IKBKBO14920 756 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 COPB2P35606 906 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 PHKA2P46019 1235 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 BEST2Q8NFU1 509 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 FAM49AQ9H0Q0 323 aaPredicted RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 GOLGA8MH3BSY2 632 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 AFPP02771 609 aaKnown RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 NSUN2Q08J23 767 aaKnown RBP eCLIP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 PIK3C2GO75747 1445 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 SFSWAPQ12872 951 aaKnown RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 FLOT2Q14254 428 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 C10orf76Q5T2E6 689 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 PHF21AQ96BD5 680 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 DNAJC7Q99615 494 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 FGFR1OP2Q9NVK5 253 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 MT-ND3P03897 115 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 SERPINB2P05120 415 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 SLC8A1P32418 973 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 MECOMQ03112 1051 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 THEMIS2Q5TEJ8 643 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 KRT39Q6A163 491 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 TRIM68Q6AZZ1 485 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 DPH5Q9H2P9 285 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 ZC4H2Q9NQZ6 224 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 SENP1Q9P0U3 644 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 SERTAD1Q9UHV2 236 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 COBLO75128 1261 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 ATP5JP18859 108 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 STAMQ92783 540 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 MRPL40Q9NQ50 206 aaKnown RBP12.04□□□□□ -0.48
SCN4A-201ENST00000435607 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 NUP160Q12769 1436 aa12.04□□□□□ -0.48
SCN4A-201ENST00000435607 KRT8P05787 483 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SESN3P58005 492 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 TRIM55Q9BYV6 548 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 PCDHGB4Q9UN71 923 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 TOM1L1O75674 476 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 CAPZA2P47755 286 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 EEPD1Q7L9B9 569 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 BUB1O43683 1085 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 VCPP55072 806 aaKnown RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 UBXN2AP68543 259 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 APOBEC3FQ8IUX4 373 aaKnown RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 NDEL1Q9GZM8 345 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SUDS3Q9H7L9 328 aaPredicted RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 DISP3Q9P2K9 1392 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 KDM1AO60341 852 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 DNAJC6O75061 913 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 E2F6O75461 281 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 NR2F2P24468 414 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SKOR1P84550 965 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 BRD3Q15059 726 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 KIF17Q9P2E2 1029 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SERPINB13Q9UIV8 391 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 NFU1Q9UMS0 254 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 L3MBTL1Q9Y468 752 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SYNDIG1LA6NDD5 238 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 ASNSP08243 561 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 RALAP11233 206 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 SEPT2Q15019 361 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 TRMT10CQ7L0Y3 403 aaKnown RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 NAF1Q96HR8 494 aaKnown RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 KBTBD13C9JR72 458 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 PRPF4O43172 522 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCN4A-201ENST00000435607 CHRNDQ07001 517 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
SCN4A-201ENST00000435607 DCUN1D1Q96GG9 259 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms