RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 VPS18Q9P253 973 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HPCAL4Q9UM19 191 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 POTEFA5A3E0 1075 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SPATA31C1P0DKV0 1188 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ERCC3P19447 782 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 RPA1P27694 616 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CIITAP33076 1130 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ICA1Q05084 483 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 GFPT1Q06210 699 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 POTEGQ6S5H5 508 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 POTEEQ6S8J3 1075 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 EPM2AIP1Q7L775 607 aaPredicted RBP17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CATSPER3Q86XQ3 398 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 NELFCDQ8IXH7 590 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 GANQ9H2C0 597 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAN1Q9Y2M0 1017 aa17.74■□□□□ 0.43
HLA-DQB2-231ENST00000435145 G3V3G9 751 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FOSP01100 380 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HNRNPH2P55795 449 aaKnown RBP17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TCP10Q12799 353 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 GIT2Q14161 759 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 DPY19L2P1Q6NXN4 242 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 COL23A1Q86Y22 540 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SYT2Q8N9I0 419 aaPredicted RBP17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM20AQ96MK3 541 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TLR10Q9BXR5 811 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 NLRC4Q9NPP4 1024 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 AIPL1Q9NZN9 384 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TRAF3IP3Q9Y228 551 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 STK24Q9Y6E0 443 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ATRNL1Q5VV63 1379 aa17.73■□□□□ 0.43
HLA-DQB2-231ENST00000435145 F5H6K3 240 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 MYBL2P10244 700 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 KLRC3Q07444 240 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 KLHDC7AQ5VTJ3 777 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 NFRKBQ6P4R8 1299 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 BTNL9Q6UXG8 535 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 KIAA0825Q8IV33 1275 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SPATA4Q8NEY3 305 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 AENQ8WTP8 325 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 NOX5Q96PH1 765 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SYF2O95926 243 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 NDUFB10O96000 172 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 POLR2FP61218 127 aaKnown RBP17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 RASSF7Q02833 373 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ADAM9Q13443 819 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 PRR16Q569H4 304 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HSP90B2PQ58FF3 399 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 KRT27Q7Z3Y8 459 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FBXO11Q86XK2 927 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ERMNQ8TAM6 284 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 UIMC1Q96RL1 719 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SCN9AQ15858 1988 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM86B1E9PN63 330 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 OPLAHO14841 1288 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CETN3O15182 167 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 FAM86B2P0C5J1 330 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 HOXD13P35453 343 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CASP5P51878 434 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 PSMC6P62333 389 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 BMT2Q1RMZ1 405 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TDRD12Q587J7 1177 aaKnown RBP17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 CCDC102AQ96A19 550 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 DRC1Q96MC2 740 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 VAV3Q9UKW4 847 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 COL2A1P02458 1487 aaPredicted RBP17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 BRWD3Q6RI45 1802 aa17.71■□□□□ 0.43
HLA-DQB2-231ENST00000435145 ZMYND10O75800 440 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PRPF6O94906 941 aaKnown RBP17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 CYP3A4P08684 503 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 NAB2Q15742 525 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SLC18A3Q16572 532 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 CCDC70Q6NSX1 233 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 FRMD5Q7Z6J6 570 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 TEX2Q8IWB9 1127 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SYNPO2Q9UMS6 1093 aa17.71■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KRT18P05783 430 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 LMAN1P49257 510 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ABCB5Q2M3G0 1257 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KCTD17Q8N5Z5 321 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ANKRD13CQ8N6S4 541 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 REEP2Q9BRK0 252 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 CRACR2AQ9BSW2 395 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 LUC7LQ9NQ29 371 aaKnown RBP17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RNF14Q9UBS8 474 aa17.7■□□□□ 0.42
HLA-DQB2-231ENST00000435145 DNM3Q9UQ16 869 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms