RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 GLIS3Q8NEA6 775 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 RAD54LQ92698 747 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 MTMR9Q96QG7 549 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 RUFY1Q96T51 708 aa11.63□□□□□ -0.55
SMPD4-206ENST00000433118 MARCH6O60337 910 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 LCA5LO95447 670 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 SSBP05455 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMPD4-206ENST00000433118 FXR2P51116 673 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ORC2Q13416 577 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-206ENST00000433118 DLGAP5Q15398 846 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ABCB5Q2M3G0 1257 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USH1GQ495M9 461 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 CCDC40Q4G0X9 1142 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 C8orf74Q6P047 294 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 TMEM39BQ9GZU3 492 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 RIOX1Q9H6W3 641 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 STIM2Q9P246 746 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 SALL4Q9UJQ4 1053 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ITIH3Q06033 890 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ASPRV1Q53RT3 343 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 USP17L6PQ6QN14 398 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 BAP1Q92560 729 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ABCB11O95342 1321 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ESYT2A0FGR8 921 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 TRAF5O00463 557 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 ECE1P42892 770 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 EPHB4P54760 987 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 PDXDC1Q6P996 788 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 RSBN1LQ6PCB5 846 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-206ENST00000433118 LRRC55Q6ZSA7 311 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 SUPT20HQ8NEM7 779 aa11.62□□□□□ -0.55
SMPD4-206ENST00000433118 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
SMPD4-206ENST00000433118 SLC9C1Q4G0N8 1177 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 CC2D2BQ6DHV5 1058 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 ZNF572Q7Z3I7 529 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-206ENST00000433118 SIAH1Q8IUQ4 282 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 MYOCDQ8IZQ8 938 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 MTMR8Q96EF0 704 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 LRRC27Q9C0I9 530 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.61□□□□□ -0.554e-6■■□□□ 13.5
SMPD4-206ENST00000433118 DNAJC21Q5F1R6 531 aaKnown RBP11.61□□□□□ -0.55
SMPD4-206ENST00000433118 MS4A14Q96JA4 679 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 RIC8AQ9NPQ8 531 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 RBM12Q9NTZ6 932 aaKnown RBP11.61□□□□□ -0.55
SMPD4-206ENST00000433118 TMOD2Q9NZR1 351 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 TBC1D7Q9P0N9 293 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
SMPD4-206ENST00000433118 SPDYE2BA6NHP3 402 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 F5H6K3 240 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 SPDYE6P0CI01 402 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 SMARCA1P28370 1054 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 KLRC3Q07444 240 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 R3HDM1Q15032 1099 aaKnown RBP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 ENOX2Q16206 610 aaKnown RBP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 HAUS3Q68CZ6 603 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 RUBCNQ92622 972 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 TLR10Q9BXR5 811 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 COL4A3BPQ9Y5P4 624 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 PJA2O43164 708 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 OPA1O60313 960 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 HSF2BPO75031 334 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 EGFRP00533 1210 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 NOVP48745 357 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 ARID5AQ03989 594 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 PSMD2Q13200 908 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 PDIA5Q14554 519 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 CFAP221Q4G0U5 840 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 KLHDC7AQ5VTJ3 777 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 SFMBT2Q5VUG0 894 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 NIM1KQ8IY84 436 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 RTKN2Q8IZC4 609 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 ACER1Q8TDN7 264 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 CCDC17Q96LX7 622 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 KANSL2Q9H9L4 492 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 SSU72P8A0A1W2PR75 194 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 hCG_1984214I3L0E3 225 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 MAGEA9P43362 315 aa11.6□□□□□ -0.55
SMPD4-206ENST00000433118 POLR2FP61218 127 aaKnown RBP11.6□□□□□ -0.55
SMPD4-206ENST00000433118 KCNMA1Q12791 1236 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms