RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 PCDHA6Q9UN73 950 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 PCDHA8Q9Y5H6 950 aa16.38■□□□□ 0.21
SMARCE1-205ENST00000431889 C5orf42Q9H799 3197 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 GSTTP1A0A1W2PQM5 241 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 PIK3CDO00329 1044 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 GHRP10912 638 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 CPA1P15085 419 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 COL9A1P20849 921 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 TMTC3Q6ZXV5 915 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 FANCBQ8NB91 859 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 HLA-CQ95604 372 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 MAP3K14Q99558 947 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 TMEM260Q9NX78 707 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 BRPF3Q9ULD4 1205 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 EMSYQ7Z589 1322 aa16.37■□□□□ 0.21
SMARCE1-205ENST00000431889 STAM2O75886 525 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 CHRNA1P02708 482 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 IBSPP21815 317 aaPredicted RBP16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 ERVK-21P61565 698 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 TMEM62Q0P6H9 643 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 MTMR1Q13613 665 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 SEPT8Q92599 483 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 YME1L1Q96TA2 773 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 LZTS2Q9BRK4 669 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 NLRC5Q86WI3 1866 aa16.36■□□□□ 0.21
SMARCE1-205ENST00000431889 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 SPDYE3A6NKU9 549 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 PPFIA3O75145 1194 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 GNAQP50148 359 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 FBXO22Q8NEZ5 403 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 TRAPPC12Q8WVT3 735 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 DNAJB3Q8WWF6 145 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 GLG1Q92896 1179 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 KHSRPQ92945 711 aaKnown RBP eCLIP16.35■□□□□ 0.216e-7■■■■■ 30.3
SMARCE1-205ENST00000431889 INSL6Q9Y581 213 aa16.35■□□□□ 0.21
SMARCE1-205ENST00000431889 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 LIFRP42702 1097 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 ADAM17P78536 824 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 PPFIA1Q13136 1202 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 IFIH1Q9BYX4 1025 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 FAM49AQ9H0Q0 323 aaPredicted RBP16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 UBIAD1Q9Y5Z9 338 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 CNTNAP5Q8WYK1 1306 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 DDX39AO00148 427 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 EFCAB14O75071 495 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 CALM1P0DP23 149 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 CALM2P0DP24 149 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 CALM3P0DP25 149 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 ARP10275 920 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 GNAT1P11488 350 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 SMARCA1P28370 1054 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 NAPAP54920 295 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 GRIK4Q16099 956 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 EP400NLQ6ZTU2 488 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 PCYT2Q99447 389 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 SENP7Q9BQF6 1050 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 V9GY48 417 aaPredicted RBP16.34■□□□□ 0.21
SMARCE1-205ENST00000431889 BDP1A6H8Y1 2624 aa16.33■□□□□ 0.21
SMARCE1-205ENST00000431889 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
SMARCE1-205ENST00000431889 AAK1Q2M2I8 961 aa16.33■□□□□ 0.2
SMARCE1-205ENST00000431889 MARCH8Q5T0T0 291 aa16.33■□□□□ 0.2
SMARCE1-205ENST00000431889 TOP1MTQ969P6 601 aa16.33■□□□□ 0.2
SMARCE1-205ENST00000431889 EPHX3Q9H6B9 360 aa16.33■□□□□ 0.2
SMARCE1-205ENST00000431889 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
SMARCE1-205ENST00000431889 KCNA5P22460 613 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 CDC27P30260 824 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 LPIN1Q14693 890 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 RTN1Q16799 776 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 XRRA1Q6P2D8 792 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 SYNE3Q6ZMZ3 975 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 CD320Q9NPF0 282 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 COG5Q9UP83 839 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 CDY2AQ9Y6F7 541 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 NRCAMQ92823 1304 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 BRWD1Q9NSI6 2320 aa16.32■□□□□ 0.2
SMARCE1-205ENST00000431889 KLF18A0A0U1RQI7 1052 aa16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 EXOSC10Q01780 885 aaKnown RBP16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 MGAT3Q09327 533 aa16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 GPM6BQ13491 265 aa16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 TRMT1LQ7Z2T5 733 aaKnown RBP16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 SGMS1Q86VZ5 419 aa16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
SMARCE1-205ENST00000431889 KCNH7Q9NS40 1196 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms