RNA–Protein interactions for RNA: ENST00000431632.5

CSNK1E-209, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-209ENST00000431632 C8orf76Q96K31 380 aa16.23■□□□□ 0.19
CSNK1E-209ENST00000431632 LBHD1Q9BQE6 289 aaPredicted RBP16.23■□□□□ 0.19
CSNK1E-209ENST00000431632 TBC1D22BQ9NU19 505 aa16.23■□□□□ 0.19
CSNK1E-209ENST00000431632 SCN10AQ9Y5Y9 1956 aa16.23■□□□□ 0.19
CSNK1E-209ENST00000431632 RANBP2P49792 3224 aaKnown RBP16.23■□□□□ 0.19
CSNK1E-209ENST00000431632 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 DDX39AO00148 427 aaKnown RBP16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 CCNE2O96020 404 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 TIMP1P01033 207 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 SUPT20HL2P0C7V6 817 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 RAG1P15918 1043 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 ACTR2P61160 394 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 SETQ01105 290 aaPredicted RBP16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 HIC1Q14526 733 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 LETM2Q2VYF4 491 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 Q4G0T1 1027 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 SESTD1Q86VW0 696 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 PRO3102Q9H379 93 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 RNPEPQ9H4A4 650 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
CSNK1E-209ENST00000431632 ATG7O95352 703 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 CYP2C9P11712 490 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 CYP2C18P33260 490 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 ZNF200P98182 395 aaPredicted RBP16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 MOXD1Q6UVY6 613 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 GJA10Q969M2 543 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 CTAGE1Q96RT6 745 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 PCYT2Q99447 389 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 PPP1R12CQ9BZL4 782 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
CSNK1E-209ENST00000431632 LGR5O75473 907 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 SMIM10L2AP0DMW4 78 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 SMIM10L2BP0DMW5 78 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 BMP8BP34820 402 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 SAFBQ15424 915 aaKnown RBP eCLIP16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 PTGISQ16647 500 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 PPP4R3AQ6IN85 833 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 ABHD15Q6UXT9 468 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 GLG1Q92896 1179 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 SLC5A5Q92911 643 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 NOC4LQ9BVI4 516 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 UBE2OQ9C0C9 1292 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 HIPK3Q9H422 1215 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 SMARCAD1Q9H4L7 1026 aa16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 DDX25Q9UHL0 483 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-209ENST00000431632 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 SLC37A4O43826 429 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 CCNT1O60563 726 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 GJB2P29033 226 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 MFSD5Q6N075 450 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 ZNF746Q6NUN9 644 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 RIT2Q99578 217 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 AZI2Q9H6S1 392 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 SETD4Q9NVD3 440 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
CSNK1E-209ENST00000431632 IGKV6D-21A0A0A0MT36 114 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 C17orf102A2RUQ5 167 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 PSMD10O75832 226 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 MARK3P27448 753 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 STAT5BP51692 787 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 KRT76Q01546 638 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 CUL4AQ13619 759 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 SWSAP1Q6NVH7 229 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 PLPPR4Q7Z2D5 763 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 ETNPPLQ8TBG4 499 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 ERAP1Q9NZ08 941 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 EMSYQ7Z589 1322 aa16.18■□□□□ 0.18
CSNK1E-209ENST00000431632 WNT7AO00755 349 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 BACH1O14867 736 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 GAS7O60861 476 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 GCFC2P16383 781 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 HOXC8P31273 242 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 EPHB4P54760 987 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 CCL23P55773 120 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 FPGSQ05932 587 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 LRCH2Q5VUJ6 765 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 MIS18BP1Q6P0N0 1132 aa16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 DHX38Q92620 1227 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 NAP1L4Q99733 375 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 FOXP1Q9H334 677 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-209ENST00000431632 TRIOBPQ9H2D6 2365 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 TREHO43280 583 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 CSF2RAP15509 400 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 ATP2B1P20020 1258 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 PTK7Q13308 1070 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 PLCB4Q15147 1175 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 HABP4Q5JVS0 413 aaKnown RBP16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 CCDC60Q8IWA6 550 aaPredicted RBP16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 HAS1Q92839 578 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 ATP6V0A1Q93050 837 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 TEKT3Q9BXF9 490 aa16.16■□□□□ 0.18
CSNK1E-209ENST00000431632 WNT8AQ9H1J5 351 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms