RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 TOP1MTQ969P6 601 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 MRPL38Q96DV4 380 aaKnown RBP9.62□□□□□ -0.87
CDH13-203ENST00000431540 PDCD2LQ9BRP1 358 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 UBA5Q9GZZ9 404 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 LMAN2LQ9H0V9 348 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 RIOX1Q9H6W3 641 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 SQORQ9Y6N5 450 aa9.62□□□□□ -0.87
CDH13-203ENST00000431540 COL4A4P53420 1690 aaPredicted RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 MUC6Q6W4X9 2439 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 KLRF2D3W0D1 207 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 H3BNC9 293 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 H3BRB1 525 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 KDM4AO75164 1064 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 KCNQ1P51787 676 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 PKDCCQ504Y2 493 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 TIGD5Q53EQ6 642 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 ZNF618Q5T7W0 954 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 ZNF589Q86UQ0 364 aaPredicted RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 NEK9Q8TD19 979 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 SEPT8Q92599 483 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 TBC1D5Q92609 795 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 UBAC1Q9BSL1 405 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 C16orf70Q9BSU1 422 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 TUT1Q9H6E5 874 aaKnown RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 COL20A1Q9P218 1284 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 PCDHA1Q9Y5I3 950 aa9.61□□□□□ -0.87
CDH13-203ENST00000431540 DDX49Q9Y6V7 483 aaKnown RBP9.61□□□□□ -0.87
CDH13-203ENST00000431540 LOXHD1Q8IVV2 1947 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 C17orf102A2RUQ5 167 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 GRXCR2A6NFK2 248 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 EPOPA6NHQ4 379 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 C5orf67F2Z3F1 127 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
CDH13-203ENST00000431540 RFXAPO00287 272 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 DGAT1O75907 488 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 CFBP00751 764 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 POLR2MP0CAP2 368 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 GOLGA8HP0CJ92 632 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 PTGS1P23219 599 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 CCND2P30279 289 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 RRP1P56182 461 aaKnown RBP9.6□□□□□ -0.87
CDH13-203ENST00000431540 HAND2P61296 217 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 TRDNQ13061 729 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 PGM5Q15124 567 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 SEC23AQ15436 765 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 NAALADL2Q58DX5 795 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
CDH13-203ENST00000431540 RASGRP2Q7LDG7 609 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 TBC1D10CQ8IV04 446 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 PLEKHM2Q8IWE5 1019 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 RILPL2Q969X0 211 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 CDHR1Q96JP9 859 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 SPATA33Q96N06 139 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 CRBNQ96SW2 442 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
CDH13-203ENST00000431540 MLXIPQ9HAP2 919 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 DIAPH3Q9NSV4 1193 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 MYO7AQ13402 2215 aa9.6□□□□□ -0.87
CDH13-203ENST00000431540 FRMPD4Q14CM0 1322 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 NRCAMQ92823 1304 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 SPATA31C2B4DYI2 1134 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 OPLAHO14841 1288 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 ADAM17P78536 824 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 NUCB1Q02818 461 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 SART3Q15020 963 aaKnown RBP9.59□□□□□ -0.87
CDH13-203ENST00000431540 PKN1Q16512 942 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 HSDL1Q3SXM5 330 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 TAF2Q6P1X5 1199 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 METTL7BQ6UX53 244 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 CHD1LQ86WJ1 897 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 GJD3Q8N144 294 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 TMTC2Q8N394 836 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 DBF4BQ8NFT6 615 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 ATP6V0A1Q93050 837 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 PABPC5Q96DU9 382 aaKnown RBP9.59□□□□□ -0.87
CDH13-203ENST00000431540 INPP4AQ96PE3 977 aaPredicted RBP9.59□□□□□ -0.87
CDH13-203ENST00000431540 LZTS2Q9BRK4 669 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 PLVAPQ9BX97 442 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 EPHX3Q9H6B9 360 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 CERS4Q9HA82 394 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 STK17AQ9UEE5 414 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 MAD2L2Q9UI95 211 aa9.59□□□□□ -0.87
CDH13-203ENST00000431540 ZNF215Q9UL58 517 aaPredicted RBP9.59□□□□□ -0.87
CDH13-203ENST00000431540 NEDD4P46934 1319 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 DOCK5Q9H7D0 1870 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 MYH9P35579 1960 aaKnown RBP9.58□□□□□ -0.88
CDH13-203ENST00000431540 ERICH2A1L162 156 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 FSD2A1L4K1 749 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 B4E1Z4 1266 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 FIBPO43427 364 aa9.58□□□□□ -0.88
CDH13-203ENST00000431540 DHX16O60231 1041 aaKnown RBP9.58□□□□□ -0.88
CDH13-203ENST00000431540 GGPS1O95749 300 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms