RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 HSCBQ8IWL3 235 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 REXO1Q8N1G1 1221 aaKnown RBP13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 CYP2W1Q8TAV3 490 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 RASGRP4Q8TDF6 673 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 INTS4Q96HW7 963 aaKnown RBP13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 TUT1Q9H6E5 874 aaKnown RBP13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 JADE2Q9NQC1 790 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 CXXC1Q9P0U4 656 aaPredicted RBP13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 KIF3AQ9Y496 699 aa13.55□□□□□ -0.24
TRERNA1-201ENST00000431460 SMIM10L2AP0DMW4 78 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 SMIM10L2BP0DMW5 78 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 MARK3P27448 753 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 TCF7P36402 384 aaPredicted RBP13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 SMAD3P84022 425 aaKnown RBP13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 TRIM29Q14134 588 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 HIC1Q14526 733 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 RPUSD2Q8IZ73 545 aaKnown RBP13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 BLIDQ8IZY5 108 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 CCDC155Q8N6L0 562 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 GIMAP8Q8ND71 665 aaPredicted RBP13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 CDHR1Q96JP9 859 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 KCNJ14Q9UNX9 436 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 SMC3Q9UQE7 1217 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 TANC1Q9C0D5 1861 aa13.54□□□□□ -0.24
TRERNA1-201ENST00000431460 C17orf102A2RUQ5 167 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 M0R2N6 131 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 IQCF3P0C7M6 154 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 ARP10275 920 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 DNAJB2P25686 324 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 SREBF1P36956 1147 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 PBX2P40425 430 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 KRT40Q6A162 431 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 LRRC8DQ7L1W4 858 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 HERVK_113Q902F9 699 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 WNT8BQ93098 351 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 SENP7Q9BQF6 1050 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 KCNH7Q9NS40 1196 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 MTMR10Q9NXD2 777 aa13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 ZNF215Q9UL58 517 aaPredicted RBP13.53□□□□□ -0.24
TRERNA1-201ENST00000431460 SCN5AQ14524 2016 aa13.52□□□□□ -0.24
TRERNA1-201ENST00000431460 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 MMP1P03956 469 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 CKBP12277 381 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 SELPP16109 830 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 GJB2P29033 226 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 CEP55Q53EZ4 464 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 FBXO18Q8NFZ0 1043 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 AFAP1L1Q8TED9 768 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 GLG1Q92896 1179 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 ATP6V0A1Q93050 837 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 VWCEQ96DN2 955 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 JPH1Q9HDC5 661 aaPredicted RBP13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 SETD4Q9NVD3 440 aa13.52□□□□□ -0.25
TRERNA1-201ENST00000431460 TREHO43280 583 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 CYP3A4P08684 503 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 CTSHP09668 335 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 KRT2P35908 639 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 THPOP40225 353 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 RABGGTBP53611 331 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 PTK7Q13308 1070 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 RASIP1Q5U651 963 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 KRT25Q7Z3Z0 450 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 TIFAQ96CG3 184 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 GUCD1Q96NT3 240 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 PBX4Q9BYU1 374 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 RNPEPQ9H4A4 650 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 SLC9A2Q9UBY0 812 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 SLC4A7Q9Y6M7 1214 aa13.51□□□□□ -0.25
TRERNA1-201ENST00000431460 GSTTP1A0A1W2PQM5 241 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 FAM86B1E9PN63 330 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 PFKMP08237 780 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 FAM86B2P0C5J1 330 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 ACTN1P12814 892 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 RFC2P35250 354 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 IGBP1P78318 339 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 ITGB3BPQ13352 177 aaPredicted RBP13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 ZNF618Q5T7W0 954 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms