RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 PCYT2Q99447 389 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 PCDHA6Q9UN73 950 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 PCDHA8Q9Y5H6 950 aa13.54□□□□□ -0.24
HDAC4-202ENST00000430200 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-202ENST00000430200 TTC3P53804 2025 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
HDAC4-202ENST00000430200 ZBTB43O43298 467 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 TCF7P36402 384 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-202ENST00000430200 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
HDAC4-202ENST00000430200 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-202ENST00000430200 NEDD9Q14511 834 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 FAM117BQ6P1L5 589 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 GDPD5Q8WTR4 605 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 CUL5Q93034 780 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 GPRASP2Q96D09 838 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 SENP7Q9BQF6 1050 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
HDAC4-202ENST00000430200 LGR5O75473 907 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 ARP10275 920 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 MARK3P27448 753 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 HSPA4P34932 840 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 ADD1P35611 737 aaKnown RBP13.52□□□□□ -0.25
HDAC4-202ENST00000430200 NAPAP54920 295 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 MTMR1Q13613 665 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 PLEKHG4Q58EX7 1191 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 MARCH8Q5T0T0 291 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 XRRA1Q6P2D8 792 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 MICALL1Q8N3F8 863 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 DBF4BQ8NFT6 615 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 ARNTL2Q8WYA1 636 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 JAKMIP1Q96N16 626 aaKnown RBP13.52□□□□□ -0.25
HDAC4-202ENST00000430200 ANO3Q9BYT9 981 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 JADE2Q9NQC1 790 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 MTCH2Q9Y6C9 303 aa13.52□□□□□ -0.25
HDAC4-202ENST00000430200 MYO7AQ13402 2215 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 EMSYQ7Z589 1322 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-202ENST00000430200 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 TLL1O43897 1013 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 GJB5O95377 273 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 KCNJ6P48051 423 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 ARHGAP4P98171 946 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 TFF2Q03403 129 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 GRB10Q13322 594 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 PKN1Q16512 942 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 PPP1R18Q6NYC8 613 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 Q6ZUG5 572 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 CRYGNQ8WXF5 182 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 BRF1Q92994 677 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 UIMC1Q96RL1 719 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 USP26Q9BXU7 913 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
HDAC4-202ENST00000430200 BARHL2Q9NY43 387 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 MTUS1Q9ULD2 1270 aa13.51□□□□□ -0.25
HDAC4-202ENST00000430200 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-202ENST00000430200 SPDYE3A6NKU9 549 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 RSPH10B2B2RC85 870 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 CCNE2O96020 404 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 RSPH10BP0C881 870 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 ADCY7P51828 1080 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 MGAT3Q09327 533 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 NLRX1Q86UT6 975 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 TRAPPC12Q8WVT3 735 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 KCNH7Q9NS40 1196 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 THEGQ9P2T0 379 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 TRIOO75962 3097 aa13.5□□□□□ -0.25
HDAC4-202ENST00000430200 IGLV3-22A0A075B6J6 115 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 ABHD14A-ACY1A0A1B0GW23 586 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 FAM86B1E9PN63 330 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 EDIL3O43854 480 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 CHRNA1P02708 482 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 FAM86B2P0C5J1 330 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 RPS6KB1P23443 525 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 SREBF1P36956 1147 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 GRIK4Q16099 956 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 NTRK3Q16288 839 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 PFKFB3Q16875 520 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-202ENST00000430200 RASGRP4Q8TDF6 673 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 LINC01599Q8WXQ3 324 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 PHKBQ93100 1093 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 NECAB3Q96P71 396 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-202ENST00000430200 MXRA8Q9BRK3 442 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 C17orf80Q9BSJ5 609 aa13.49□□□□□ -0.25
HDAC4-202ENST00000430200 NCOA5Q9HCD5 579 aaKnown RBP13.49□□□□□ -0.25
HDAC4-202ENST00000430200 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
HDAC4-202ENST00000430200 MBLAC1A4D2B0 266 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 DTNBO60941 627 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 PARNO95453 639 aaKnown RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 KCNQ1P51787 676 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 RCAN1P53805 252 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 HTRA4P83105 476 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms