RNA–Protein interactions for RNA: ENST00000429804.7

CTCFL-207, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-207ENST00000429804 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
CTCFL-207ENST00000429804 SH2D3CQ8N5H7 860 aa11.9□□□□□ -0.5
CTCFL-207ENST00000429804 ERMNQ8TAM6 284 aa11.9□□□□□ -0.5
CTCFL-207ENST00000429804 PURBQ96QR8 312 aaKnown RBP11.9□□□□□ -0.5
CTCFL-207ENST00000429804 EHD4Q9H223 541 aa11.9□□□□□ -0.5
CTCFL-207ENST00000429804 ATP6V0A2Q9Y487 856 aa11.9□□□□□ -0.5
CTCFL-207ENST00000429804 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 HPDP32754 393 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 HSPA1LP34931 641 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 CARSP49589 748 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 ZNF543Q08ER8 600 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 PDCLQ13371 301 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 PRPF4BQ13523 1007 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 BAP1Q92560 729 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 GOLPH3Q9H4A6 298 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 ARMCX3Q9UH62 379 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 ACTN1P12814 892 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 KCNH2Q12809 1159 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 DNAAF5Q86Y56 855 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 PACSIN1Q9BY11 444 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 PCDHB13Q9Y5F0 798 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 MYH10P35580 1976 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 SSU72P8A0A1W2PR75 194 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 ZBTB5O15062 677 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 PRPF6O94906 941 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 KRT14P02533 472 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 HNRNPH3P31942 346 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 LIG3P49916 1009 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 IRAK1P51617 712 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 RHBDL3P58872 404 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 KLHDC7AQ5VTJ3 777 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 RNF10Q8N5U6 811 aaKnown RBP11.89□□□□□ -0.51
CTCFL-207ENST00000429804 ARL8AQ96BM9 186 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 DNM3Q9UQ16 869 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 ROBO3Q96MS0 1386 aa11.89□□□□□ -0.51
CTCFL-207ENST00000429804 A0A087X0T9 212 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 FAM228BP0C875 321 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 SMARCA1P28370 1054 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 KCNMA1Q12791 1236 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 NNTQ13423 1086 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 KRT27Q7Z3Y8 459 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
CTCFL-207ENST00000429804 FGFBP2Q9BYJ0 223 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 COL16A1Q07092 1604 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-207ENST00000429804 AGPSO00116 658 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 XRCC5P13010 732 aaKnown RBP11.88□□□□□ -0.51
CTCFL-207ENST00000429804 CACNB3P54284 484 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 GPATCH4Q5T3I0 446 aaKnown RBP11.88□□□□□ -0.51
CTCFL-207ENST00000429804 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-207ENST00000429804 PPM1EQ8WY54 764 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 GCNT3O95395 438 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 GCFC2P16383 781 aaKnown RBP11.88□□□□□ -0.51
CTCFL-207ENST00000429804 PRLRP16471 622 aa11.88□□□□□ -0.51
CTCFL-207ENST00000429804 CLIC2O15247 247 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 GLI1P08151 1106 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 SLC18A3Q16572 532 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 IFI16Q16666 785 aaKnown RBP11.87□□□□□ -0.51
CTCFL-207ENST00000429804 EXOC3L4Q17RC7 722 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 CEP85LQ5SZL2 805 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 TBC1D16Q8TBP0 767 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 CERKQ8TCT0 537 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 CEP63Q96MT8 703 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 AP1M1Q9BXS5 423 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 EDEM3Q9BZQ6 932 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-207ENST00000429804 POLLQ9UGP5 575 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 CHMP2AO43633 222 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 MAGEA9P43362 315 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 SEPT2Q15019 361 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-207ENST00000429804 RNF187Q5TA31 235 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-207ENST00000429804 ALS2CLQ60I27 953 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 HAS1Q92839 578 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 ZIM3Q96PE6 472 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 ANO3Q9BYT9 981 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 SLC9A1P19634 815 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 PPP4R3AQ6IN85 833 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 DNAJC19Q96DA6 116 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 TRIM31Q9BZY9 425 aa11.87□□□□□ -0.51
CTCFL-207ENST00000429804 BBOX1O75936 387 aa11.86□□□□□ -0.51
CTCFL-207ENST00000429804 TMEM119Q4V9L6 283 aa11.86□□□□□ -0.51
CTCFL-207ENST00000429804 SLFN13Q68D06 897 aa11.86□□□□□ -0.51
CTCFL-207ENST00000429804 GBP6Q6ZN66 633 aa11.86□□□□□ -0.51
CTCFL-207ENST00000429804 PEX26Q7Z412 305 aa11.86□□□□□ -0.51
CTCFL-207ENST00000429804 SFR1Q86XK3 245 aa11.86□□□□□ -0.51
CTCFL-207ENST00000429804 NAP1L4Q99733 375 aaKnown RBP11.86□□□□□ -0.51
CTCFL-207ENST00000429804 RNF14Q9UBS8 474 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms