RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 MROH7-TTC4A0A0A0MT08 1334 aa7.95□□□□□ -1.14
CNOT4-206ENST00000428680 FGAP02671 866 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 SETQ01105 290 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 HSP90AA4PQ58FG1 418 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 RUFY3Q7L099 469 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 SYMPKQ92797 1274 aaKnown RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 TMEM39BQ9GZU3 492 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 NCOA5Q9HCD5 579 aaKnown RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 KMT5AQ9NQR1 393 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 C1orf112Q9NSG2 853 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 POLR3EQ9NVU0 708 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 WDR64B1ANS9 1081 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 K7ERI5 159 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 GIPC1O14908 333 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 ZSCAN12O43309 604 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 STX17P56962 302 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 FMR1Q06787 632 aaKnown RBP eCLIP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 GLB1LQ6UWU2 654 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 HAUS6Q7Z4H7 955 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 DAAM2Q86T65 1068 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 PSPC1Q8WXF1 523 aaKnown RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 FAM84BQ96KN1 310 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 DISC1Q9NRI5 854 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 MAP3K20Q9NYL2 800 aaKnown RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 KCNJ14Q9UNX9 436 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 DDX60LQ5H9U9 1706 aaKnown RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 SYNJ2BP-COX16A0A087WUM0 186 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 ZNF233A6NK53 670 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 HTRA3P83110 453 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 TEX35Q5T0J7 233 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 PI16Q6UXB8 463 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 PDZD4Q76G19 769 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 TBC1D31Q96DN5 1066 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 ZBTB40Q9NUA8 1239 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 COX16Q9P0S2 106 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 A0A0G2JLL6 359 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 GH1P01241 217 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 BCRP11274 1271 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 CPT1AP50416 773 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 SNAP25P60880 206 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 MTMR1Q13613 665 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 STX1AQ16623 288 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 FAM109BQ6ICB4 259 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 RCSD1Q6JBY9 416 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 PRRT2Q7Z6L0 340 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 TRIM50Q86XT4 487 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 SSH3Q8TE77 659 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 SCFD2Q8WU76 684 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 N4BP2L2Q92802 583 aaPredicted RBP7.94□□□□□ -1.14
CNOT4-206ENST00000428680 PGBD4Q96DM1 585 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 PIGSQ96S52 555 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 GDPD2Q9HCC8 539 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 TSKSQ9UJT2 592 aa7.94□□□□□ -1.14
CNOT4-206ENST00000428680 E7EWF7 191 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 SLC27A2O14975 620 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 WDR46O15213 610 aaKnown RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 STRNO43815 780 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 ERLIN1O75477 346 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 FARP2O94887 1054 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 ZNF18P17022 549 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 ABCD1P33897 745 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PPP4CP60510 307 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 TSTA3Q13630 321 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 MUM1L1Q5H9M0 696 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 SCYL2Q6P3W7 929 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 ABRAQ8N0Z2 381 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 CMTR1Q8N1G2 835 aaKnown RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 TMX3Q96JJ7 454 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 MORF4L1Q9UBU8 362 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 DPP7Q9UHL4 492 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PCDHB15Q9Y5E8 787 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PTPRZ1P23471 2315 aaPredicted RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 SPOPO43791 374 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 GCFC2P16383 781 aaKnown RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 FGFR2P21802 821 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 NBPF9Q3BBW0 867 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 BTBD8Q5XKL5 378 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 LCORLQ8N3X6 602 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 RPF1Q9H9Y2 349 aaKnown RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PRRG1O14668 218 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 TECP42680 631 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PPFIA1Q13136 1202 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 MAPK6Q16659 721 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 SDE2Q6IQ49 451 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 CCDC42Q96M95 316 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 CGNQ9P2M7 1197 aaKnown RBP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.93□□□□□ -1.14
CNOT4-206ENST00000428680 COL4A1P02462 1669 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 MROH7Q68CQ1 1323 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 IRS2Q9Y4H2 1338 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 PRKAB2O43741 272 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 TADA2AO75478 443 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 SEC24BO95487 1268 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 RPS6KB1P23443 525 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 CIITAP33076 1130 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 TNFAIP2Q03169 654 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 KRT33BQ14525 404 aa7.93□□□□□ -1.14
CNOT4-206ENST00000428680 TKFCQ3LXA3 575 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms