RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 APOA5Q6Q788 366 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 GPRASP2Q96D09 838 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 NECAB3Q96P71 396 aaPredicted RBP17.84■□□□□ 0.45
SEC13-210ENST00000428626 PKD2L1Q9P0L9 805 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 MTUS1Q9ULD2 1270 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 SIP14410 1827 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 KAT6AQ92794 2004 aa17.83■□□□□ 0.45
SEC13-210ENST00000428626 EMSYQ7Z589 1322 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 TNFRSF10AO00220 468 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 BMP1P13497 986 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 TCF7P36402 384 aaPredicted RBP17.83■□□□□ 0.44
SEC13-210ENST00000428626 RUFY4Q6ZNE9 571 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 HEATR3Q7Z4Q2 680 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 NLRX1Q86UT6 975 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 NEK1Q96PY6 1258 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 SUGCTQ9HAC7 445 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 FAM217BQ9NTX9 383 aaPredicted RBP17.83■□□□□ 0.44
SEC13-210ENST00000428626 PCDHA6Q9UN73 950 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 PCDHA8Q9Y5H6 950 aa17.83■□□□□ 0.44
SEC13-210ENST00000428626 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.82■□□□□ 0.44
SEC13-210ENST00000428626 GTPBP6O43824 516 aaPredicted RBP17.82■□□□□ 0.44
SEC13-210ENST00000428626 EFCAB14O75071 495 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 ERVK-21P61565 698 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 ARHGAP4P98171 946 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 SKIV2LQ15477 1246 aaKnown RBP17.82■□□□□ 0.44
SEC13-210ENST00000428626 MYOCDQ8IZQ8 938 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 CYP2W1Q8TAV3 490 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 PGBD1Q96JS3 809 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 PCYT2Q99447 389 aa17.82■□□□□ 0.44
SEC13-210ENST00000428626 CHRNA1P02708 482 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 MARK3P27448 753 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 HTRA4P83105 476 aaPredicted RBP17.81■□□□□ 0.44
SEC13-210ENST00000428626 TSGA10IPQ3SY00 556 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 FAM26DQ5JW98 314 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 CENPQQ7L2Z9 268 aaPredicted RBP17.81■□□□□ 0.44
SEC13-210ENST00000428626 ZBTB10Q96DT7 871 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 UHRF1Q96T88 793 aaPredicted RBP17.81■□□□□ 0.44
SEC13-210ENST00000428626 C17orf80Q9BSJ5 609 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 JADE2Q9NQC1 790 aa17.81■□□□□ 0.44
SEC13-210ENST00000428626 ZNF215Q9UL58 517 aaPredicted RBP17.81■□□□□ 0.44
SEC13-210ENST00000428626 CAND2O75155 1236 aa17.8■□□□□ 0.44
SEC13-210ENST00000428626 CPA1P15085 419 aa17.8■□□□□ 0.44
SEC13-210ENST00000428626 CDC27P30260 824 aa17.8■□□□□ 0.44
SEC13-210ENST00000428626 MTMR1Q13613 665 aa17.8■□□□□ 0.44
SEC13-210ENST00000428626 MARCH8Q5T0T0 291 aa17.8■□□□□ 0.44
SEC13-210ENST00000428626 DHX32Q7L7V1 743 aaKnown RBP17.8■□□□□ 0.44
SEC13-210ENST00000428626 GIMAP8Q8ND71 665 aaPredicted RBP17.8■□□□□ 0.44
SEC13-210ENST00000428626 SP7Q8TDD2 431 aaPredicted RBP17.8■□□□□ 0.44
SEC13-210ENST00000428626 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
SEC13-210ENST00000428626 TGS1Q96RS0 853 aaKnown RBP17.8■□□□□ 0.44
SEC13-210ENST00000428626 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 SPDYE3A6NKU9 549 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 ADAMTS3O15072 1205 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 AMHP03971 560 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 GNAT1P11488 350 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 MGAT3Q09327 533 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 RTN1Q16799 776 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 SEPT8Q92599 483 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 TOP1MTQ969P6 601 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 TSPYL2Q9H2G4 693 aaPredicted RBP17.79■□□□□ 0.44
SEC13-210ENST00000428626 TMEM260Q9NX78 707 aa17.79■□□□□ 0.44
SEC13-210ENST00000428626 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
SEC13-210ENST00000428626 MYO7AQ13402 2215 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 MBLAC1A4D2B0 266 aaPredicted RBP17.78■□□□□ 0.44
SEC13-210ENST00000428626 STXBP3O00186 592 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 ZBTB43O43298 467 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 ARP10275 920 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 NAPAP54920 295 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 PPFIA1Q13136 1202 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 CDHR1Q96JP9 859 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 MXRA8Q9BRK3 442 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 EHMT1Q9H9B1 1298 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 RIC8AQ9NPQ8 531 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 KCNH7Q9NS40 1196 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 RBM28Q9NW13 759 aaKnown RBP17.78■□□□□ 0.44
SEC13-210ENST00000428626 INSL6Q9Y581 213 aa17.78■□□□□ 0.44
SEC13-210ENST00000428626 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 CDC45O75419 566 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 UPP2O95045 317 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 GHRP10912 638 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 ITGB3BPQ13352 177 aaPredicted RBP17.77■□□□□ 0.44
SEC13-210ENST00000428626 GRIK4Q16099 956 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 RPAINQ86UA6 219 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 IFIH1Q9BYX4 1025 aaKnown RBP17.77■□□□□ 0.44
SEC13-210ENST00000428626 ERAP1Q9NZ08 941 aa17.77■□□□□ 0.44
SEC13-210ENST00000428626 GOLGA8AA7E2F4 631 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 GOLGA8BA8MQT2 603 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 ADD1P35611 737 aaKnown RBP17.76■□□□□ 0.43
SEC13-210ENST00000428626 CLK2P49760 499 aaKnown RBP17.76■□□□□ 0.43
SEC13-210ENST00000428626 LPIN1Q14693 890 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 DNAJB3Q8WWF6 145 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 GLG1Q92896 1179 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 KCNB2Q92953 911 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 JPH1Q9HDC5 661 aaPredicted RBP17.76■□□□□ 0.43
SEC13-210ENST00000428626 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 SLC9A2Q9UBY0 812 aa17.76■□□□□ 0.43
SEC13-210ENST00000428626 TUBE1Q9UJT0 475 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms