RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 GLG1Q92896 1179 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 SLC9A7Q96T83 725 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 RNF26Q9BY78 433 aaPredicted RBP21.03■□□□□ 0.96
GPC1-205ENST00000427506 ZMYND12Q9H0C1 365 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 JPH1Q9HDC5 661 aaPredicted RBP21.03■□□□□ 0.96
GPC1-205ENST00000427506 YBX2Q9Y2T7 364 aaKnown RBP21.03■□□□□ 0.96
GPC1-205ENST00000427506 DOCK5Q9H7D0 1870 aa21.03■□□□□ 0.96
GPC1-205ENST00000427506 GSTTP1A0A1W2PQM5 241 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 ESYT2A0FGR8 921 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 BAIAP3O94812 1187 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 ARP10275 920 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 GNA11P29992 359 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 ARHGAP4P98171 946 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 NTRK3Q16288 839 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 MCTP2Q6DN12 878 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 CNKSR3Q6P9H4 555 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 REXO1Q8N1G1 1221 aaKnown RBP21.02■□□□□ 0.96
GPC1-205ENST00000427506 LARP6Q9BRS8 491 aaKnown RBP21.02■□□□□ 0.96
GPC1-205ENST00000427506 PDRG1Q9NUG6 133 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 SLC9A2Q9UBY0 812 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 PCDHA11Q9Y5I1 949 aa21.02■□□□□ 0.96
GPC1-205ENST00000427506 LAMA2P24043 3122 aaKnown RBP21.01■□□□□ 0.95
GPC1-205ENST00000427506 RSPH10B2B2RC85 870 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 CPLX1O14810 134 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 NBNO60934 754 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 RSPH10BP0C881 870 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 MARK3P27448 753 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 HOXC8P31273 242 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 GPNMBQ14956 572 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 TRIM22Q8IYM9 498 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 CCDC148Q8NFR7 591 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 MAFAQ8NHW3 353 aaPredicted RBP21.01■□□□□ 0.95
GPC1-205ENST00000427506 PHOSPHO2Q8TCD6 241 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 BICD2Q8TD16 824 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 SMARCAD1Q9H4L7 1026 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 ERAP1Q9NZ08 941 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 NRCAMQ92823 1304 aa21.01■□□□□ 0.95
GPC1-205ENST00000427506 TRIP12Q14669 1992 aaPredicted RBP21■□□□□ 0.95
GPC1-205ENST00000427506 CXCL10P02778 98 aa21■□□□□ 0.95
GPC1-205ENST00000427506 MYOGP15173 224 aa21■□□□□ 0.95
GPC1-205ENST00000427506 SSRP1Q08945 709 aaKnown RBP21■□□□□ 0.95
GPC1-205ENST00000427506 STK3Q13188 491 aa21■□□□□ 0.95
GPC1-205ENST00000427506 PPP2R2DQ66LE6 453 aa21■□□□□ 0.95
GPC1-205ENST00000427506 ZNF274Q96GC6 653 aaPredicted RBP21■□□□□ 0.95
GPC1-205ENST00000427506 GAS2L1Q99501 681 aaPredicted RBP21■□□□□ 0.95
GPC1-205ENST00000427506 PRDM12Q9H4Q4 367 aa21■□□□□ 0.95
GPC1-205ENST00000427506 AZI2Q9H6S1 392 aa21■□□□□ 0.95
GPC1-205ENST00000427506 AGO4Q9HCK5 861 aaKnown RBP21■□□□□ 0.95
GPC1-205ENST00000427506 NFASCO94856 1347 aa21■□□□□ 0.95
GPC1-205ENST00000427506 EMSYQ7Z589 1322 aa21■□□□□ 0.95
GPC1-205ENST00000427506 KIF28PB7ZC32 967 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 MEIS1O00470 390 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 PPFIA1Q13136 1202 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 IKBKEQ14164 716 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 CPLX2Q6PUV4 134 aaKnown RBP20.99■□□□□ 0.95
GPC1-205ENST00000427506 TRAF7Q6Q0C0 670 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 PLA2G4DQ86XP0 818 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 LMBR1Q8WVP7 490 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 VPS54Q9P1Q0 977 aa20.99■□□□□ 0.95
GPC1-205ENST00000427506 LGR5O75473 907 aa20.98■□□□□ 0.95
GPC1-205ENST00000427506 CTSHP09668 335 aa20.98■□□□□ 0.95
GPC1-205ENST00000427506 NLRP5P59047 1200 aa20.98■□□□□ 0.95
GPC1-205ENST00000427506 ACTR2P61160 394 aa20.98■□□□□ 0.95
GPC1-205ENST00000427506 WDR5P61964 334 aaKnown RBP20.98■□□□□ 0.95
GPC1-205ENST00000427506 NIPA1Q7RTP0 329 aa20.98■□□□□ 0.95
GPC1-205ENST00000427506 HERC6Q8IVU3 1022 aa20.98■□□□□ 0.95
GPC1-205ENST00000427506 ABHD14A-ACY1A0A1B0GW23 586 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 FAM86B1E9PN63 330 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 DDX39AO00148 427 aaKnown RBP20.97■□□□□ 0.95
GPC1-205ENST00000427506 ADAMTS3O15072 1205 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 EFCAB14O75071 495 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 CAND2O75155 1236 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 CA3P07451 260 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 CYP3A4P08684 503 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 FAM86B2P0C5J1 330 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 ITGB3BPQ13352 177 aaPredicted RBP20.97■□□□□ 0.95
GPC1-205ENST00000427506 MBTPS1Q14703 1052 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 RASGRP4Q8TDF6 673 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 ZBED2Q9BTP6 218 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 SH3GLB2Q9NR46 395 aa20.97■□□□□ 0.95
GPC1-205ENST00000427506 IGBP1P78318 339 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 ADAM17P78536 824 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 GRIK4Q16099 956 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 TCTN1Q2MV58 587 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 TNPO1Q92973 898 aaKnown RBP20.96■□□□□ 0.95
GPC1-205ENST00000427506 UIMC1Q96RL1 719 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 PCYT2Q99447 389 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 TRPC6Q9Y210 931 aa20.96■□□□□ 0.95
GPC1-205ENST00000427506 TLL1O43897 1013 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 EIF5BO60841 1220 aaKnown RBP20.95■□□□□ 0.94
GPC1-205ENST00000427506 DEXIO95424 95 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 STAT5BP51692 787 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 ANAPC15P60006 121 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 DEFB103AP81534 67 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 RSPH3Q86UC2 560 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 DBF4BQ8NFT6 615 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 CRYGNQ8WXF5 182 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 ZNF577Q9BSK1 485 aa20.95■□□□□ 0.94
GPC1-205ENST00000427506 TUBE1Q9UJT0 475 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms