RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 NRIP1P48552 1158 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 HSD17B4P51659 736 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 HAND2P61296 217 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 SP2Q02086 613 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 PNMA1Q8ND90 353 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 ZNF689Q96CS4 500 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-206ENST00000426196 ZNF215Q9UL58 517 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-206ENST00000426196 BARX2Q9UMQ3 279 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-206ENST00000426196 MYO10Q9HD67 2058 aa16.5■□□□□ 0.23
HDAC6-206ENST00000426196 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 ITGB1P05556 798 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 CCND2P30279 289 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 ARHGAP4P98171 946 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 PGM5Q15124 567 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 VSIG10LQ86VR7 867 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 DGKHQ86XP1 1220 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 ESR2Q92731 530 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 RNF41Q9H4P4 317 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-206ENST00000426196 KAT14Q9H8E8 782 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 HELLSQ9NRZ9 838 aa16.49■□□□□ 0.23
HDAC6-206ENST00000426196 MAP3K20Q9NYL2 800 aaKnown RBP16.49■□□□□ 0.23
HDAC6-206ENST00000426196 PLXNA4Q9HCM2 1894 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 FSD2A1L4K1 749 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-206ENST00000426196 DGKIO75912 1065 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 GLP2RO95838 553 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 CHRNA1P02708 482 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 ATF7P17544 494 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-206ENST00000426196 DNAJB1P25685 340 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 GHRHRQ02643 423 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 STOX1Q6ZVD7 989 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 ASCL5Q7RTU5 278 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 ZBTB33Q86T24 672 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 RBM23Q86U06 439 aaKnown RBP16.48■□□□□ 0.23
HDAC6-206ENST00000426196 CMTR2Q8IYT2 770 aaKnown RBP16.48■□□□□ 0.23
HDAC6-206ENST00000426196 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 POF1BQ8WVV4 589 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 ZKSCAN3Q9BRR0 538 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 AMNQ9BXJ7 453 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 VAT1LQ9HCJ6 419 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
HDAC6-206ENST00000426196 CACNA1BQ00975 2339 aa16.48■□□□□ 0.23
HDAC6-206ENST00000426196 PRR23AA6NEV1 266 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 ENPP3O14638 875 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 MX1P20591 662 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 GNPTABQ3T906 1256 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 TAF2Q6P1X5 1199 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 RSPH3Q86UC2 560 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 IQCA1Q86XH1 822 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 KLHL23Q8NBE8 558 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 TLE6Q9H808 572 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 EHMT1Q9H9B1 1298 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 DMXL1Q9Y485 3027 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 LOXHD1Q8IVV2 1947 aa16.47■□□□□ 0.23
HDAC6-206ENST00000426196 NRCAMQ92823 1304 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 TRIM6-TRIM34B2RNG4 842 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 OPLAHO14841 1288 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 PARP1P09874 1014 aaKnown RBP16.46■□□□□ 0.23
HDAC6-206ENST00000426196 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-206ENST00000426196 ADAM17P78536 824 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 NEDD9Q14511 834 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 LPIN1Q14693 890 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 METTL7BQ6UX53 244 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 TRIM50Q86XT4 487 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 OTUD7AQ8TE49 926 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-206ENST00000426196 GPKOWQ92917 476 aaPredicted RBP eCLIP16.46■□□□□ 0.232e-6■■□□□ 12.7
HDAC6-206ENST00000426196 RIPOR3Q96MK2 946 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 TRPC6Q9Y210 931 aa16.46■□□□□ 0.23
HDAC6-206ENST00000426196 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
HDAC6-206ENST00000426196 LAMA4Q16363 1823 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 NBL1P41271 181 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 NT5C2P49902 561 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 PAN2Q504Q3 1202 aaKnown RBP16.45■□□□□ 0.22
HDAC6-206ENST00000426196 UTP14CQ5TAP6 766 aaKnown RBP16.45■□□□□ 0.22
HDAC6-206ENST00000426196 TSHZ1Q6ZSZ6 1077 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 CYFIP1Q7L576 1253 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 NPAS4Q8IUM7 802 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 SUSD6Q92537 303 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 EVI5LQ96CN4 794 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 NEK1Q96PY6 1258 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 GPR20Q99678 358 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 EP300Q09472 2414 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-206ENST00000426196 NEDD4P46934 1319 aa16.45■□□□□ 0.22
HDAC6-206ENST00000426196 PDGFBP01127 241 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-206ENST00000426196 SRGAP2BP0DMP2 458 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 ID4P47928 161 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 MGAT3Q09327 533 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 FBXO47Q5MNV8 452 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms