RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MARCH8Q5T0T0 291 aa17.28■□□□□ 0.36
ATG4B-209ENST00000425239 RALYLQ86SE5 291 aaKnown RBP17.28■□□□□ 0.36
ATG4B-209ENST00000425239 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
ATG4B-209ENST00000425239 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
ATG4B-209ENST00000425239 SAMD11Q96NU1 681 aa17.28■□□□□ 0.36
ATG4B-209ENST00000425239 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
ATG4B-209ENST00000425239 RC3H2Q9HBD1 1191 aaKnown RBP17.28■□□□□ 0.36
ATG4B-209ENST00000425239 ATG2AQ2TAZ0 1938 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 NRCAMQ92823 1304 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 NLRC5Q86WI3 1866 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 MYO7AQ13402 2215 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 GRXCR2A6NFK2 248 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 UPP2O95045 317 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 GNAT1P11488 350 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 IL9P15248 144 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 KCNA5P22460 613 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.36
ATG4B-209ENST00000425239 UTP14CQ5TAP6 766 aaKnown RBP17.27■□□□□ 0.36
ATG4B-209ENST00000425239 RUFY4Q6ZNE9 571 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 CRIPAKQ8N1N5 446 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 APBB2Q92870 758 aa17.27■□□□□ 0.36
ATG4B-209ENST00000425239 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 MBLAC1A4D2B0 266 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 C5orf67F2Z3F1 127 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 DDAH1O94760 285 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 TCF7P36402 384 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 ARHGAP4P98171 946 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 GPM6BQ13491 265 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 TMEM31Q5JXX7 168 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 CMTR1Q8N1G2 835 aaKnown RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 GPRASP2Q96D09 838 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 RRP36Q96EU6 259 aaKnown RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
ATG4B-209ENST00000425239 UBIAD1Q9Y5Z9 338 aa17.26■□□□□ 0.35
ATG4B-209ENST00000425239 RALGAPA2Q2PPJ7 1873 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 SH2B2O14492 632 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-209ENST00000425239 ENPP3O14638 875 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 LTBRP36941 435 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 LPIN1Q14693 890 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 GJD3Q8N144 294 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 GIMAP8Q8ND71 665 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-209ENST00000425239 BANK1Q8NDB2 785 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 SMARCC2Q8TAQ2 1214 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 ZNF689Q96CS4 500 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-209ENST00000425239 YME1L1Q96TA2 773 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 PCYT2Q99447 389 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 LSG1Q9H089 658 aaKnown RBP17.25■□□□□ 0.35
ATG4B-209ENST00000425239 ZNF215Q9UL58 517 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-209ENST00000425239 TTC3P53804 2025 aa17.25■□□□□ 0.35
ATG4B-209ENST00000425239 POTEB3A0JP26 581 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-209ENST00000425239 SP4Q02446 784 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 CTC1Q2NKJ3 1217 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 TCEAL5Q5H9L2 206 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 PTCRAQ6ISU1 281 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-209ENST00000425239 POTEBQ6S5H4 581 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 RTN4RL1Q86UN2 441 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-209ENST00000425239 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 PABPC5Q96DU9 382 aaKnown RBP17.24■□□□□ 0.35
ATG4B-209ENST00000425239 FAM122AQ96E09 287 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
ATG4B-209ENST00000425239 FAM86C2PA6NEL3 165 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 PRC1O43663 620 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 KIF5BP33176 963 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 LIFRP42702 1097 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 CAMK1Q14012 370 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 NECTIN1Q15223 517 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 PTPROQ16827 1216 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 FBXO47Q5MNV8 452 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 TAF2Q6P1X5 1199 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-209ENST00000425239 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 CLP1Q92989 425 aaKnown RBP17.23■□□□□ 0.35
ATG4B-209ENST00000425239 CUL5Q93034 780 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
ATG4B-209ENST00000425239 hCG_1642624A0A1W2PR95 340 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 H3BQ06 376 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-209ENST00000425239 GHRP10912 638 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 RXRAP19793 462 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 BMPR1AP36894 532 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 GRIK4Q16099 956 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 TIGD5Q53EQ6 642 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 TMTC2Q8N394 836 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 DNAJB3Q8WWF6 145 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 ZBTB10Q96DT7 871 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 AGO3Q9H9G7 860 aaKnown RBP17.22■□□□□ 0.35
ATG4B-209ENST00000425239 JADE2Q9NQC1 790 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 ERAP1Q9NZ08 941 aa17.22■□□□□ 0.35
ATG4B-209ENST00000425239 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 SLC27A2O14975 620 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 GRM6O15303 877 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 MAFGO15525 162 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 DGKIO75912 1065 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 RB1P06400 928 aa17.21■□□□□ 0.35
ATG4B-209ENST00000425239 MCM5P33992 734 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms