RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 VAT1LQ9HCJ6 419 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 MUTYHQ9UIF7 546 aa18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-204ENST00000424438 ADGRA3Q8IWK6 1321 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 NRCAMQ92823 1304 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 HIP1O00291 1037 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 NOP56O00567 594 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 MBTPS2O43462 519 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 RPLP2P05387 115 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 NAALADL2Q58DX5 795 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 IFIT1BQ5T764 474 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 TAF2Q6P1X5 1199 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 XRRA1Q6P2D8 792 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 P2RX5Q93086 422 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 GPR20Q99678 358 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 MAD2L2Q9UI95 211 aa18.03■□□□□ 0.48
RPUSD3-204ENST00000424438 FIBPO43427 364 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 UPP2O95045 317 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 MMP1P03956 469 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 HOXA13P31271 388 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 CTNNB1P35222 781 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 HYAL1Q12794 435 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 AAMPQ13685 434 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 PBXIP1Q96AQ6 731 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 ZNF689Q96CS4 500 aaPredicted RBP18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 OSBPL7Q9BZF2 842 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 DOCK5Q9H7D0 1870 aa18.02■□□□□ 0.48
RPUSD3-204ENST00000424438 PTPRZ1P23471 2315 aaPredicted RBP18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 EYA4O95677 639 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 CTSHP09668 335 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 EDAQ92838 391 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 GPKOWQ92917 476 aaPredicted RBP eCLIP18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 PPP2R3CQ969Q6 453 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 IRF2BPLQ9H1B7 796 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 SETD4Q9NVD3 440 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 SQORQ9Y6N5 450 aa18.01■□□□□ 0.47
RPUSD3-204ENST00000424438 C5orf42Q9H799 3197 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 GRM6O15303 877 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 SEMA3FQ13275 785 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 GRM4Q14833 912 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 RNF135Q8IUD6 432 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
RPUSD3-204ENST00000424438 RILPL2Q969X0 211 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 CFAP54Q96N23 3096 aa18■□□□□ 0.47
RPUSD3-204ENST00000424438 PNMA6FA0A0J9YX94 578 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 TMEM221A6NGB7 291 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 M0R296 226 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 CHRNA1P02708 482 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 MGAT3Q09327 533 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 ADAM15Q13444 863 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 SLC35G1Q2M3R5 365 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 IER5LQ5T953 404 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 RSPH3Q86UC2 560 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 SMC5Q8IY18 1101 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 MSLNLQ96KJ4 702 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 CD207Q9UJ71 328 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 SPTBN4Q9H254 2564 aa17.99■□□□□ 0.47
RPUSD3-204ENST00000424438 USP34Q70CQ2 3546 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 MBLAC1A4D2B0 266 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 TBX10O75333 385 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 DGKIO75912 1065 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 ARHGAP4P98171 946 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 DLX2Q07687 328 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 CBX2Q14781 532 aaPredicted RBP17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 PCNX4Q63HM2 1172 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 TRIM67Q6ZTA4 783 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 CYFIP1Q7L576 1253 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 CRIPAKQ8N1N5 446 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 BCAS3Q9H6U6 928 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 KIAA1671Q9BY89 1806 aa17.98■□□□□ 0.47
RPUSD3-204ENST00000424438 PIK3CDO00329 1044 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 ENPP3O14638 875 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 SORBS3O60504 671 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 TCF15Q12870 199 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 COASYQ13057 564 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 LPIN1Q14693 890 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 CLUL1Q15846 466 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 FCHSD1Q86WN1 690 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 PLEKHM2Q8IWE5 1019 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 CMTR2Q8IYT2 770 aaKnown RBP17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 ATOH1Q92858 354 aaPredicted RBP17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 PIGSQ96S52 555 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 FTHL17Q9BXU8 183 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 PLAGL2Q9UPG8 496 aa17.97■□□□□ 0.47
RPUSD3-204ENST00000424438 FSD2A1L4K1 749 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 STXBP3O00186 592 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 CYTH3O43739 400 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 TROAPQ12815 778 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 CAMK1Q14012 370 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 BTG3Q14201 252 aaPredicted RBP17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 FBXO47Q5MNV8 452 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 TSHZ1Q6ZSZ6 1077 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 TRIM50Q86XT4 487 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms