RNA–Protein interactions for RNA: ENST00000422254.5

HDAC7-207, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-207ENST00000422254 NEDD9Q14511 834 aa18.03■□□□□ 0.48
HDAC7-207ENST00000422254 PCNX4Q63HM2 1172 aa18.03■□□□□ 0.48
HDAC7-207ENST00000422254 RRP36Q96EU6 259 aaKnown RBP18.03■□□□□ 0.48
HDAC7-207ENST00000422254 TMEM87BQ96K49 555 aa18.03■□□□□ 0.48
HDAC7-207ENST00000422254 LZTS2Q9BRK4 669 aa18.03■□□□□ 0.48
HDAC7-207ENST00000422254 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
HDAC7-207ENST00000422254 RNPEPQ9H4A4 650 aa18.03■□□□□ 0.48
HDAC7-207ENST00000422254 REV3LO60673 3130 aa18.03■□□□□ 0.48
HDAC7-207ENST00000422254 C17orf102A2RUQ5 167 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 TREHO43280 583 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 BMP1P13497 986 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 THPOP40225 353 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 LIFRP42702 1097 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 EXOSC10Q01780 885 aaKnown RBP18.02■□□□□ 0.48
HDAC7-207ENST00000422254 TFF2Q03403 129 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 XRRA1Q6P2D8 792 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.02■□□□□ 0.48
HDAC7-207ENST00000422254 CYFIP1Q7L576 1253 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 DBF4BQ8NFT6 615 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 ATP6V0A1Q93050 837 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 RAD9AQ99638 391 aa18.02■□□□□ 0.48
HDAC7-207ENST00000422254 EMSYQ7Z589 1322 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 SIP14410 1827 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 RSPH10B2B2RC85 870 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 NOP56O00567 594 aaKnown RBP18.01■□□□□ 0.47
HDAC7-207ENST00000422254 RSPH10BP0C881 870 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 PTMSP20962 102 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 GNAQP50148 359 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 RCAN1P53805 252 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 ADAM17P78536 824 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 PLEKHG4Q58EX7 1191 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 TRIM50Q86XT4 487 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
HDAC7-207ENST00000422254 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 SMARCC2Q8TAQ2 1214 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 UHRF1Q96T88 793 aaPredicted RBP18.01■□□□□ 0.47
HDAC7-207ENST00000422254 SENP7Q9BQF6 1050 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 ZBED2Q9BTP6 218 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 OSBPL7Q9BZF2 842 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 TRANK1O15050 2925 aa18.01■□□□□ 0.47
HDAC7-207ENST00000422254 LINC01553A4QN01 128 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 RXRAP19793 462 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 ERVK-21P61565 698 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 CUL5Q93034 780 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 ZNF274Q96GC6 653 aaPredicted RBP18■□□□□ 0.47
HDAC7-207ENST00000422254 LLPHQ9BRT6 129 aaKnown RBP18■□□□□ 0.47
HDAC7-207ENST00000422254 SUGCTQ9HAC7 445 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 SETD4Q9NVD3 440 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 SEC63Q9UGP8 760 aaKnown RBP18■□□□□ 0.47
HDAC7-207ENST00000422254 KIF3AQ9Y496 699 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 NCOR1O75376 2440 aa18■□□□□ 0.47
HDAC7-207ENST00000422254 CCDC69A6NI79 296 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 CAND2O75155 1236 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 PDCP20941 246 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 KCNQ1P51787 676 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 HTRA4P83105 476 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-207ENST00000422254 FGD1P98174 961 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 CLEC17AQ6ZS10 378 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 GDPD5Q8WTR4 605 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 NECAB3Q96P71 396 aaPredicted RBP17.99■□□□□ 0.47
HDAC7-207ENST00000422254 LMCD1Q9NZU5 365 aa17.99■□□□□ 0.47
HDAC7-207ENST00000422254 ATP9AO75110 1047 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 CALM1P0DP23 149 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 CALM2P0DP24 149 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 CALM3P0DP25 149 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 KCNA2P16389 499 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 ITGB5P18084 799 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 SKIV2LQ15477 1246 aaKnown RBP17.98■□□□□ 0.47
HDAC7-207ENST00000422254 AAK1Q2M2I8 961 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 FAM117BQ6P1L5 589 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 TMTC3Q6ZXV5 915 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 NLRX1Q86UT6 975 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 SGMS1Q86VZ5 419 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 RAB11FIP4Q86YS3 637 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-207ENST00000422254 LMBR1Q8WVP7 490 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 GPRASP2Q96D09 838 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 TGS1Q96RS0 853 aaKnown RBP17.98■□□□□ 0.47
HDAC7-207ENST00000422254 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
HDAC7-207ENST00000422254 PSTPIP2Q9H939 334 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 COG5Q9UP83 839 aa17.98■□□□□ 0.47
HDAC7-207ENST00000422254 hCG_1642624A0A1W2PR95 340 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 FAM26DQ5JW98 314 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 UTP14CQ5TAP6 766 aaKnown RBP17.97■□□□□ 0.47
HDAC7-207ENST00000422254 FANCBQ8NB91 859 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 LRRC2Q9BYS8 371 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 ZNF215Q9UL58 517 aaPredicted RBP17.97■□□□□ 0.47
HDAC7-207ENST00000422254 INSL6Q9Y581 213 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 UBIAD1Q9Y5Z9 338 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 KAT6AQ92794 2004 aa17.97■□□□□ 0.47
HDAC7-207ENST00000422254 GSTTP1A0A1W2PQM5 241 aa17.96■□□□□ 0.47
HDAC7-207ENST00000422254 AMHP03971 560 aa17.96■□□□□ 0.47
HDAC7-207ENST00000422254 CTSHP09668 335 aa17.96■□□□□ 0.47
HDAC7-207ENST00000422254 GNAT1P11488 350 aa17.96■□□□□ 0.47
HDAC7-207ENST00000422254 SP4Q02446 784 aa17.96■□□□□ 0.47
HDAC7-207ENST00000422254 TOB2Q14106 344 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-207ENST00000422254 UBE2SQ16763 222 aa17.96■□□□□ 0.47
HDAC7-207ENST00000422254 GIMAP8Q8ND71 665 aaPredicted RBP17.96■□□□□ 0.47
HDAC7-207ENST00000422254 SEPT8Q92599 483 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms