RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ARHGAP4P98171 946 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 GUCY2DQ02846 1103 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 MYO1FO00160 1098 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 MMP10P09238 476 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 SLMAPQ14BN4 828 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 MCPH1Q8NEM0 835 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 GJD4Q96KN9 370 aaPredicted RBP16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 KCND2Q9NZV8 630 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 STIM2Q9P246 746 aa16.1■□□□□ 0.17
AP000550.1-201ENST00000420508 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 STAM2O75886 525 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 HEXIM1O94992 359 aaKnown RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 RXRBP28702 533 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 CDC25AP30304 524 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 KRT76Q01546 638 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 ADSSL1Q8N142 457 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 TUFT1Q9NNX1 390 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 SART1O43290 800 aaKnown RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 RASSF2P50749 326 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 CCZ1BP86790 482 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 CCZ1P86791 482 aaPredicted RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 FRMD5Q7Z6J6 570 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 CCDC63Q8NA47 563 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 TRIM6Q9C030 488 aaPredicted RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 COL5A2P05997 1499 aaPredicted RBP16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 TMEM191BP0C7N4 346 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 CCNA1P78396 465 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 CIAPIN1Q6FI81 312 aa16.09■□□□□ 0.17
AP000550.1-201ENST00000420508 XPOTO43592 962 aaKnown RBP16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 ATP2C2O75185 946 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 ENTPD3O75355 529 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 ATF2P15336 505 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 ERCC3P19447 782 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 PIK3CAP42336 1068 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 FBXO38Q6PIJ6 1188 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 FAM133AQ8N9E0 248 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 MTMR4Q9NYA4 1195 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 CACNA1FO60840 1977 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 UBE4BO95155 1302 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 ATP11AP98196 1134 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 GOLGA8FQ08AF8 430 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 GOLGA8DPQ0D2H9 430 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 TOGARAM2Q6ZUX3 1019 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 DPH6Q7L8W6 267 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 CCDC110Q8TBZ0 833 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 KRT12Q99456 494 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 FBXO40Q9UH90 709 aa16.08■□□□□ 0.17
AP000550.1-201ENST00000420508 PABPN1LA6NDY0 278 aaKnown RBP16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 MXRA7P84157 204 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 CACNA2D3Q8IZS8 1091 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 MARCH10Q8NA82 808 aaPredicted RBP16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 SMCR8Q8TEV9 937 aaPredicted RBP16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 PNMA6AP0CW24 399 aaPredicted RBP16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 HDLBPQ00341 1268 aaKnown RBP16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 ALKBH5Q6P6C2 394 aaKnown RBP16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 TRIM9Q9C026 710 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 ZMYND12Q9H0C1 365 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 USTQ9Y2C2 406 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 MRFAP1Q9Y605 127 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 FMN2Q9NZ56 1722 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 FLT1P17948 1338 aa16.08■□□□□ 0.16
AP000550.1-201ENST00000420508 A0A1W2PQJ5 194 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 ZNF543Q08ER8 600 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 NR1I3Q14994 352 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 STRIP1Q5VSL9 837 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 PPP1R21Q6ZMI0 780 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 PDZD4Q76G19 769 aaPredicted RBP16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 C10orf67Q8IYJ2 551 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 FUCA2Q9BTY2 467 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 BHMT2Q9H2M3 363 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 AFF2P51816 1311 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 ITIH3Q06033 890 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 GKAP1Q5VSY0 366 aaPredicted RBP16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 GPR75-ASB3A0A0A6YYF3 556 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 M0QZ92 97 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 SNAP23O00161 211 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 PDXKO00764 312 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 ECE2O60344 883 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 NR3C1P04150 777 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 GUCY2FP51841 1108 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 GTF2A1P52655 376 aaPredicted RBP16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 MAP7D3Q8IWC1 876 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 FAM167AQ96KS9 214 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 SSX2IPQ9Y2D8 614 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 TNS2Q63HR2 1409 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 MED7O43513 233 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 NMT2O60551 498 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 GH2P01242 217 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 RSAD2Q8WXG1 361 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 NCAPGQ9BPX3 1015 aa16.07■□□□□ 0.16
AP000550.1-201ENST00000420508 PFASO15067 1338 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms