RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ADAM17P78536 824 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 DLX2Q07687 328 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 HYAL1Q12794 435 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 EP400NLQ6ZTU2 488 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 STAG2Q8N3U4 1231 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 C11orf84Q9BUA3 381 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 UPF3BQ9BZI7 483 aaKnown RBP11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 BCAS3Q9H6U6 928 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 ZSWIM5Q9P217 1185 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 ADGRA3Q8IWK6 1321 aa11.85□□□□□ -0.51
TNFAIP3-202ENST00000420009 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 ZBTB5O15062 677 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 GRM6O15303 877 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 MBTPS2O43462 519 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 GNAT1P11488 350 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 SDSP20132 328 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 ICAM3P32942 547 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 BMPR1AP36894 532 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 SEMA3FQ13275 785 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 SMAD4Q13485 552 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 SLC35G1Q2M3R5 365 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 METTL7BQ6UX53 244 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 TRIM50Q86XT4 487 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 FIBCD1Q8N539 461 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 LMBR1Q8WVP7 490 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 ZFP91Q96JP5 570 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 INPP4AQ96PE3 977 aaPredicted RBP11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 GPR20Q99678 358 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 USP26Q9BXU7 913 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 MUTYHQ9UIF7 546 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 RWDD3Q9Y3V2 267 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 PCDHA1Q9Y5I3 950 aa11.84□□□□□ -0.51
TNFAIP3-202ENST00000420009 PALM3A6NDB9 673 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 KLRF2D3W0D1 207 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 MMP1P03956 469 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 MRPS9P82933 396 aaKnown RBP11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 HDAC1Q13547 482 aaPredicted RBP11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 SEC23AQ15436 765 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 CLUL1Q15846 466 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 GNPTABQ3T906 1256 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 MFSD14AQ96MC6 490 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 UBAC1Q9BSL1 405 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 MAD2L2Q9UI95 211 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 TECTAO75443 2155 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 MYO7AQ13402 2215 aa11.83□□□□□ -0.52
TNFAIP3-202ENST00000420009 SPATA31C2B4DYI2 1134 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 STAM2O75886 525 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 CHRNA1P02708 482 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 GTF2F1P35269 517 aaKnown RBP eCLIP11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 MGAT3Q09327 533 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 CAMK1Q14012 370 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 NEDD9Q14511 834 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 IFIT1BQ5T764 474 aaKnown RBP11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 FCHSD1Q86WN1 690 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 EDAQ92838 391 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 RILPL2Q969X0 211 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 ZNF689Q96CS4 500 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 DSCC1Q9BVC3 393 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 KRT23Q9C075 422 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 ZNF215Q9UL58 517 aaPredicted RBP11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 TELO2Q9Y4R8 837 aa11.82□□□□□ -0.52
TNFAIP3-202ENST00000420009 LINC01565O15544 149 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 FIBPO43427 364 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 EYA4O95677 639 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 GHRP10912 638 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 ARHGAP4P98171 946 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 TRAF1Q13077 416 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 LPIN1Q14693 890 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 IMMTQ16891 758 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 CYFIP1Q7L576 1253 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 HOMER1Q86YM7 354 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 PRSS33Q8NF86 280 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 MSLNLQ96KJ4 702 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 PHOX2BQ99453 314 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 RIOX1Q9H6W3 641 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 CNNM2Q9H8M5 875 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 CD207Q9UJ71 328 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 SUPT16HQ9Y5B9 1047 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 NRCAMQ92823 1304 aa11.81□□□□□ -0.52
TNFAIP3-202ENST00000420009 STXBP3O00186 592 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 CYTH3O43739 400 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 DGKIO75912 1065 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 ADAM15Q13444 863 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 GRM4Q14833 912 aa11.8□□□□□ -0.52
TNFAIP3-202ENST00000420009 TAF2Q6P1X5 1199 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms