RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 MAPK4P31152 587 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 COPB2P35606 906 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 USP11P51784 963 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 IL17AQ16552 155 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 TRIM65Q6PJ69 517 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 C4orf32Q8N8J7 132 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 PCDHA7Q9UN72 937 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 VWA3AA6NCI4 1184 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 PTPREP23469 700 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 CDC25AP30304 524 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 ATP2C1P98194 919 aaPredicted RBP14.36□□□□□ -0.11
LINC00642-201ENST00000419459 GRB14Q14449 540 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 DPCR1Q3MIW9 517 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 CEP55Q53EZ4 464 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 PCNX4Q63HM2 1172 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 PLEKHH3Q7Z736 793 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 EXOC4Q96A65 974 aa14.36□□□□□ -0.11
LINC00642-201ENST00000419459 TNPO2O14787 897 aaKnown RBP14.35□□□□□ -0.11
LINC00642-201ENST00000419459 TXKP42681 527 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
LINC00642-201ENST00000419459 NCAPHQ15003 741 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 CALCRLQ16602 461 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 MCTP2Q6DN12 878 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 DPP9Q86TI2 863 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
LINC00642-201ENST00000419459 LRRN4CLQ8ND94 238 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 HAS1Q92839 578 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 TRIM47Q96LD4 638 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
LINC00642-201ENST00000419459 ARHGAP6O43182 974 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 RGS20O76081 388 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 CYP3A4P08684 503 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 ARP10275 920 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 PSMC4P43686 418 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 CC2D1AQ6P1N0 951 aaPredicted RBP14.34□□□□□ -0.11
LINC00642-201ENST00000419459 SAMD3Q8N6K7 520 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 IQUBQ8NA54 791 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 DNERQ8NFT8 737 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 ARFGAP3Q9NP61 516 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 FBXO2Q9UK22 296 aaPredicted RBP14.34□□□□□ -0.11
LINC00642-201ENST00000419459 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 POTEMA6NI47 508 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 PP2D1A8MPX8 630 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 STRNO43815 780 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 SORBS3O60504 671 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
LINC00642-201ENST00000419459 OR52Z1P0C646 297 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 TUBB4BP68371 445 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 FANCCQ00597 558 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 SMC1AQ14683 1233 aaKnown RBP14.34□□□□□ -0.11
LINC00642-201ENST00000419459 USP49Q70CQ1 688 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC00642-201ENST00000419459 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
LINC00642-201ENST00000419459 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 GOLGA5Q8TBA6 731 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 RABGGTAQ92696 567 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 RASSF4Q9H2L5 321 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 KCNH7Q9NS40 1196 aa14.34□□□□□ -0.11
LINC00642-201ENST00000419459 CYP3A7-CYP3A51PA0A087WV96 503 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 MSH4O15457 936 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 GCFC2P16383 781 aaKnown RBP14.33□□□□□ -0.12
LINC00642-201ENST00000419459 CYP2B6P20813 491 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 CYP3A7P24462 503 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 OAS2P29728 719 aaKnown RBP14.33□□□□□ -0.12
LINC00642-201ENST00000419459 CCND2P30279 289 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 CIITAP33076 1130 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 TECP42680 631 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 NDUFA8P51970 172 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 SP3Q02447 781 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 MTMR1Q13613 665 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 CCL14Q16627 93 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 ZNF792Q3KQV3 632 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 AXDND1Q5T1B0 1012 aaPredicted RBP14.33□□□□□ -0.12
LINC00642-201ENST00000419459 TEX2Q8IWB9 1127 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 REXO1L1PQ8IX06 675 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 ETNPPLQ8TBG4 499 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 MTMR9Q96QG7 549 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 MXRA8Q9BRK3 442 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 CSRNP2Q9H175 543 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 KCNMB3Q9NPA1 279 aa14.33□□□□□ -0.12
LINC00642-201ENST00000419459 ADD3Q9UEY8 706 aaKnown RBP14.33□□□□□ -0.12
LINC00642-201ENST00000419459 MEIS1O00470 390 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 PPP6R2O75170 966 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 MORN1Q5T089 497 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 SEPT14Q6ZU15 432 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
LINC00642-201ENST00000419459 ABRAQ8N0Z2 381 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
LINC00642-201ENST00000419459 MBOAT7Q96N66 472 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 CARD6Q9BX69 1037 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 BCAS3Q9H6U6 928 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 GABRQQ9UN88 632 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 ZNF236Q9UL36 1845 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 A0A1B0GVL5 298 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 CCDC151A5D8V7 595 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 VGLL3A8MV65 326 aa14.32□□□□□ -0.12
LINC00642-201ENST00000419459 DDX39AO00148 427 aaKnown RBP14.32□□□□□ -0.12
LINC00642-201ENST00000419459 MARCH6O60337 910 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms