RNA–Protein interactions for RNA: ENST00000417641.6

VRK2-203, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK2, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-203ENST00000417641 CCDC188H7C350 402 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 KCNK3O14649 394 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 DAPK3O43293 454 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 EDIL3O43854 480 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PPFIA2O75334 1257 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 IL2RBP14784 551 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 CHRNDQ07001 517 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ZNF268Q14587 947 aaPredicted RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 KIAA0753Q2KHM9 967 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 DGKHQ86XP1 1220 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 FMNL3Q8IVF7 1028 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PROM2Q8N271 834 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 GLIS3Q8NEA6 775 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 MDM1Q8TC05 714 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ATP8B4Q8TF62 1192 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ATXN2LQ8WWM7 1075 aaKnown RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 L3MBTL3Q96JM7 780 aaPredicted RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 PSMD1Q99460 953 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 LSM14BQ9BX40 385 aaKnown RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 ZMYND12Q9H0C1 365 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 SLITRK6Q9H5Y7 841 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 DCP1AQ9NPI6 582 aaPredicted RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 RIC8AQ9NPQ8 531 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 LUC7LQ9NQ29 371 aaKnown RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 IL17RBQ9NRM6 502 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 COL4A1P02462 1669 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 BAZ2AQ9UIF9 1905 aaKnown RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 A0A1B0GUL6 1792 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ATP8B3O60423 1300 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 CYP2D6P10635 497 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ITGA4P13612 1032 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 MMP13P45452 471 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PPARDQ03181 441 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PSMD2Q13200 908 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PPP2R5AQ15172 486 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 SV2BQ7L1I2 683 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 TRIM59Q8IWR1 403 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ZC3H3Q8IXZ2 948 aaKnown RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 KIRREL3Q8IZU9 778 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 CCDC197Q8NCU1 140 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 STAMBPL1Q96FJ0 436 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 MTMR9Q96QG7 549 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.61□□□□□ -1.03
VRK2-203ENST00000417641 TRIM6Q9C030 488 aaPredicted RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 DDX47Q9H0S4 455 aaKnown RBP8.61□□□□□ -1.03
VRK2-203ENST00000417641 CCDC134Q9H6E4 229 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 BATF3Q9NR55 127 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 TMOD3Q9NYL9 352 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ABCF2Q9UG63 623 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ADAMTS1Q9UHI8 967 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 ZBTB1Q9Y2K1 713 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 COL4A3BPQ9Y5P4 624 aa8.61□□□□□ -1.03
VRK2-203ENST00000417641 PGRMC1O00264 195 aaKnown RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 KIF3CO14782 793 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 CEP104O60308 925 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 TECP42680 631 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 POLR2FP61218 127 aaKnown RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 ORC2Q13416 577 aaPredicted RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 C10orf76Q5T2E6 689 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 CDCA2Q69YH5 1023 aaPredicted RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 HIBCHQ6NVY1 386 aaPredicted RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 KRT25Q7Z3Z0 450 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 IRF2BP2Q7Z5L9 587 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 CPLX4Q7Z7G2 160 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 UBLCP1Q8WVY7 318 aaPredicted RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 TAF4BQ92750 862 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 BCCIPQ9P287 314 aaKnown RBP eCLIP8.6□□□□□ -1.03
VRK2-203ENST00000417641 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 NOC2LQ9Y3T9 749 aaKnown RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 NUP98P52948 1817 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 MYH1P12882 1939 aa8.6□□□□□ -1.03
VRK2-203ENST00000417641 BAZ2BQ9UIF8 2168 aaKnown RBP8.6□□□□□ -1.03
VRK2-203ENST00000417641 PALM3A6NDB9 673 aaPredicted RBP8.59□□□□□ -1.03
VRK2-203ENST00000417641 ATP2C2O75185 946 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 NEBLO76041 1014 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 NUDT17P0C025 328 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 GNAQP50148 359 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 EIF3BP55884 814 aaKnown RBP8.59□□□□□ -1.03
VRK2-203ENST00000417641 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
VRK2-203ENST00000417641 LRRC41Q15345 812 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 TMEM119Q4V9L6 283 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 LRCH2Q5VUJ6 765 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 MSL1Q68DK7 614 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 PROSER2Q86WR7 435 aaPredicted RBP8.59□□□□□ -1.03
VRK2-203ENST00000417641 CEP120Q8N960 986 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 PNMA1Q8ND90 353 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 TPCN2Q8NHX9 752 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 CCHCR1Q8TD31 782 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 RAD54LQ92698 747 aa8.59□□□□□ -1.03
VRK2-203ENST00000417641 NSUN4Q96CB9 384 aaKnown RBP8.59□□□□□ -1.03
VRK2-203ENST00000417641 DNAJC19Q96DA6 116 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms