RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 DEFB103AP81534 67 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 SP2Q02086 613 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 TAP1Q03518 808 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 PTK7Q13308 1070 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 GRM4Q14833 912 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 SEC23AQ15436 765 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 HSDL1Q3SXM5 330 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 GNPTABQ3T906 1256 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 MYSM1Q5VVJ2 828 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 CNKSR3Q6P9H4 555 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 STOX1Q6ZVD7 989 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 CYFIP1Q7L576 1253 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 VSIG10LQ86VR7 867 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 RAB11FIP4Q86YS3 637 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 MYOCDQ8IZQ8 938 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 CMTR1Q8N1G2 835 aaKnown RBP8.05□□□□□ -1.12
COPS3-202ENST00000417352 IL31RAQ8NI17 732 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 GPKOWQ92917 476 aaPredicted RBP eCLIP8.05□□□□□ -1.12
COPS3-202ENST00000417352 NECAB3Q96P71 396 aaPredicted RBP8.05□□□□□ -1.12
COPS3-202ENST00000417352 TUT1Q9H6E5 874 aaKnown RBP8.05□□□□□ -1.12
COPS3-202ENST00000417352 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 CDH23Q9H251 3354 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 ABHD14A-ACY1A0A1B0GW23 586 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 LCHNA4D1U4 455 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 EPOPA6NHQ4 379 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 OPLAHO14841 1288 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 NBNO60934 754 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 PARNO95453 639 aaKnown RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 AMHP03971 560 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 RXRAP19793 462 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 IBSPP21815 317 aaPredicted RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 UBA1P22314 1058 aaKnown RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 KIF5BP33176 963 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 USP17L6PQ6QN14 398 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 TET1Q8NFU7 2136 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 GDPD5Q8WTR4 605 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 DHX38Q92620 1227 aaKnown RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 TATDN2Q93075 761 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 HLA-CQ95604 372 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 VWCEQ96DN2 955 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 MAF1Q9H063 256 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 MAP3K20Q9NYL2 800 aaKnown RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 NAP1L2Q9ULW6 460 aaPredicted RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 RBM8AQ9Y5S9 174 aaKnown RBP8.04□□□□□ -1.12
COPS3-202ENST00000417352 MTCH2Q9Y6C9 303 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 DOCK5Q9H7D0 1870 aa8.04□□□□□ -1.12
COPS3-202ENST00000417352 CHD9Q3L8U1 2897 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 TANC1Q9C0D5 1861 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 hCG_1642624A0A1W2PR95 340 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 C3orf80F5H4A9 247 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 PRC1O43663 620 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 LGR5O75473 907 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 CSPG5O95196 566 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 F2P00734 622 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 LGALS2P05162 132 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 SMIM10L2AP0DMW4 78 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 SMIM10L2BP0DMW5 78 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 TGFB3P10600 412 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 GNAT1P11488 350 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 ARHGAP4P98171 946 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 GRB10Q13322 594 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 NEDD9Q14511 834 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.03□□□□□ -1.12
COPS3-202ENST00000417352 SPRED2Q7Z698 418 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 SESTD1Q86VW0 696 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 ZNF654Q8IZM8 581 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 GLG1Q92896 1179 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 EMID1Q96A84 441 aaPredicted RBP8.03□□□□□ -1.12
COPS3-202ENST00000417352 RAD9AQ99638 391 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 BCAS3Q9H6U6 928 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 RIOX1Q9H6W3 641 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 PSTPIP2Q9H939 334 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 SETD4Q9NVD3 440 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 WDR70Q9NW82 654 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 ZNF215Q9UL58 517 aaPredicted RBP8.03□□□□□ -1.12
COPS3-202ENST00000417352 ARIH1Q9Y4X5 557 aaPredicted RBP8.03□□□□□ -1.12
COPS3-202ENST00000417352 TAF6LQ9Y6J9 622 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 KAT6AQ92794 2004 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 EMSYQ7Z589 1322 aa8.03□□□□□ -1.12
COPS3-202ENST00000417352 PRRC2BQ5JSZ5 2229 aaKnown RBP8.02□□□□□ -1.13
COPS3-202ENST00000417352 SGSM2O43147 1006 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 TREHO43280 583 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 CYTH3O43739 400 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 EFCAB14O75071 495 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 ARHGEF15O94989 841 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 MARK3P27448 753 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 MCM5P33992 734 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 IGBP1P78318 339 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 FGD1P98174 961 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 TROAPQ12815 778 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 HEATR3Q7Z4Q2 680 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 NLRX1Q86UT6 975 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 TRIM50Q86XT4 487 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 SAMD3Q8N6K7 520 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 DBF4BQ8NFT6 615 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 IGDCC4Q8TDY8 1250 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 SEPT8Q92599 483 aa8.02□□□□□ -1.13
COPS3-202ENST00000417352 WNT8BQ93098 351 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms