RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 HSF5Q4G112 596 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 ATAT1Q5SQI0 421 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 UBXN11Q5T124 520 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 RNF220Q5VTB9 566 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 YOD1Q5VVQ6 348 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 IER5Q5VY09 327 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 GALNT17Q6IS24 598 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 APOA5Q6Q788 366 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 CRTC1Q6UUV9 634 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 UNC5AQ6ZN44 842 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 LRRC69Q6ZNQ3 347 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 RALYLQ86SE5 291 aaKnown RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 RPAP2Q8IXW5 612 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 SYTL1Q8IYJ3 562 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 CMTR1Q8N1G2 835 aaKnown RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 TSPYL6Q8N831 410 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 C1orf127Q8N9H9 656 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 SMC1BQ8NDV3 1235 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 ANKK1Q8NFD2 765 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 LILRB1Q8NHL6 650 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 BICD2Q8TD16 824 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 ERCC4Q92889 916 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 PTPRN2Q92932 1015 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 HPS3Q969F9 1004 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 C1GALT1C1Q96EU7 318 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 CDCA5Q96FF9 252 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 BICD1Q96G01 975 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 GMCL1Q96IK5 515 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 NECAB3Q96P71 396 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 TSGA13Q96PP4 275 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 GSDMAQ96QA5 445 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 UIMC1Q96RL1 719 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 EYA3Q99504 573 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 FSD1Q9BTV5 496 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 C1QTNF2Q9BXJ5 285 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 VPS33BQ9H267 617 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 SLC52A2Q9HAB3 445 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 ITM2CQ9NQX7 267 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 STARD7Q9NQZ5 370 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 PLSCR4Q9NRQ2 329 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 HAUS2Q9NVX0 235 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNHIT6Q9NWK9 470 aaKnown RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 TRMT1Q9NXH9 659 aaKnown RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 HOXC10Q9NYD6 342 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 C6orf203Q9P0P8 240 aaPredicted RBP3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 SUN2Q9UH99 717 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 MOSPD1Q9UJG1 213 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 VPS28Q9UK41 221 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 FBXL5Q9UKA1 691 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 POLHQ9Y253 713 aa3.52□□□□□ -1.85
CTDSPL-203ENST00000416688 PIK3R4Q99570 1358 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 C17orf113A0A1B0GUU1 675 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ANKRD34BA5PLL1 514 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 H3BML4 177 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 PSMA7O14818 248 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 HOXC11O43248 304 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 COQ9O75208 318 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 TADA3O75528 432 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 TUSC2O75896 110 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 SOAT2O75908 522 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 USP1O94782 785 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 SFTPCP11686 197 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ALOX15P16050 662 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ITGA6P23229 1130 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 CCNCP24863 283 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 MC4RP32245 332 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ADH7P40394 386 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 PSMC4P43686 418 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 VEGFBP49765 207 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 MRE11P49959 708 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 IDH3AP50213 366 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 YARSP54577 528 aaKnown RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 RAC1P63000 192 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 HTRA3P83110 453 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 SATB1Q01826 763 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 RPL6Q02878 288 aaKnown RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ZBTB16Q05516 673 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 DMTNQ08495 405 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF267Q14586 743 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 MUM1L1Q5H9M0 696 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 FAM209BQ5JX69 171 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 C11orf88Q6PI97 169 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 KDELC1Q6UW63 502 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 BTNL9Q6UXG8 535 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 CCBE1Q6UXH8 406 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 MAMDC2Q7Z304 686 aaPredicted RBP3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 FGD2Q7Z6J4 655 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 SLC9B2Q86UD5 537 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 PPFIBP1Q86W92 1011 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 TMTC1Q8IUR5 882 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 DENND1CQ8IV53 801 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 GRAMD1CQ8IYS0 662 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 NUP93Q8N1F7 819 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 GALNT15Q8N3T1 639 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 CCDC24Q8N4L8 307 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 TMCO5AQ8N6Q1 288 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 ZNF511Q8NB15 262 aa3.51□□□□□ -1.85
CTDSPL-203ENST00000416688 AVL9Q8NBF6 648 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms