RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 YWHAGP61981 247 aaKnown RBP eCLIP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 SLC27A3Q5K4L6 730 aa11.53□□□□□ -0.56
COL12A1-203ENST00000416123 DHTKD1Q96HY7 919 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 MAGEF1Q9HAY2 307 aa11.53□□□□□ -0.56
COL12A1-203ENST00000416123 XPAP23025 273 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 SNRNP48Q6IEG0 339 aaKnown RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 TTC30BQ8N4P2 665 aa11.53□□□□□ -0.56
COL12A1-203ENST00000416123 CACYBPQ9HB71 228 aaKnown RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 GJD4Q96KN9 370 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-203ENST00000416123 TMEM206Q9H813 350 aa11.53□□□□□ -0.56
COL12A1-203ENST00000416123 USP17L10C9JJH3 530 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 MYO1EQ12965 1108 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 MIS12Q9H081 205 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 TTC36A6NLP5 189 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 PCK1P35558 622 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 TRIP13Q15645 432 aaPredicted RBP11.52□□□□□ -0.56
COL12A1-203ENST00000416123 PPFIBP2Q8ND30 876 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 PARD3BQ8TEW8 1205 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 GSDMAQ96QA5 445 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 LRRC4Q9HBW1 653 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 SPTLC3Q9NUV7 552 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 SRPRBQ9Y5M8 271 aaKnown RBP11.52□□□□□ -0.56
COL12A1-203ENST00000416123 ARHGAP31Q2M1Z3 1444 aa11.52□□□□□ -0.56
COL12A1-203ENST00000416123 POTEMA6NI47 508 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 FTCDO95954 541 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 ACTN1P12814 892 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 DSTYKQ6XUX3 929 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 SLC17A8Q8NDX2 589 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 STAG1Q8WVM7 1258 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-203ENST00000416123 BHMT2Q9H2M3 363 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 ADGRB3O60242 1522 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 PASD1Q8IV76 773 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 ANKRD20A3Q5VUR7 823 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 CABS1Q96KC9 395 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 WHAMMP3Q1A5X7 153 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 ACRBPQ8NEB7 543 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 ZWILCHQ9H900 591 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 TYW1Q9NV66 732 aaKnown RBP11.52□□□□□ -0.57
COL12A1-203ENST00000416123 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
COL12A1-203ENST00000416123 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
COL12A1-203ENST00000416123 INPP5BP32019 993 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 SLC12A1Q13621 1099 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 KCTD16Q68DU8 428 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 FOXP4Q8IVH2 680 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-203ENST00000416123 FIS1Q9Y3D6 152 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 ESYT2A0FGR8 921 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 MAN2A1Q16706 1144 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 CFAP36Q96G28 342 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 IPO11Q9UI26 975 aaKnown RBP11.51□□□□□ -0.57
COL12A1-203ENST00000416123 PYCARDQ9ULZ3 195 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 KRT1P04264 644 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 DNAAF3Q8N9W5 541 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 CASP2P42575 452 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 FKBP3Q00688 224 aaKnown RBP11.51□□□□□ -0.57
COL12A1-203ENST00000416123 MUM1L1Q5H9M0 696 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 HDAC11Q96DB2 347 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 LRRIQ1Q96JM4 1722 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 LRRC7Q96NW7 1537 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 RIMS1Q86UR5 1692 aaKnown RBP11.51□□□□□ -0.57
COL12A1-203ENST00000416123 BPIFB4P59827 614 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 PPFIA1Q13136 1202 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 TMEM47Q9BQJ4 181 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 NUF2Q9BZD4 464 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 MED7O43513 233 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 SPP2Q13103 211 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 NECTIN1Q15223 517 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 SGO2Q562F6 1265 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
COL12A1-203ENST00000416123 ADGRF4Q8IZF3 695 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 DCAF4Q8WV16 495 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 MADDQ8WXG6 1647 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 UNC13BO14795 1591 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 ARHGAP42A6NI28 874 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 IFNAR1P17181 557 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 DNAJC24Q6P3W2 148 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 MCUQ8NE86 351 aa11.51□□□□□ -0.57
COL12A1-203ENST00000416123 NHEJ1Q9H9Q4 299 aaPredicted RBP11.51□□□□□ -0.57
COL12A1-203ENST00000416123 NCAPD2Q15021 1401 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 STK25O00506 426 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 ANXA13P27216 316 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 STAT3P40763 770 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 RWDD4Q6NW29 188 aaKnown RBP11.5□□□□□ -0.57
COL12A1-203ENST00000416123 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 EXOC8Q8IYI6 725 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 THNSL1Q8IYQ7 743 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
COL12A1-203ENST00000416123 MMP19Q99542 508 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 SLITRK6Q9H5Y7 841 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 CLGNO14967 610 aa11.5□□□□□ -0.57
COL12A1-203ENST00000416123 SEPT6Q14141 434 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms