RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 BCS1LQ9Y276 419 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 LGR5O75473 907 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 ZFYP08048 801 aaPredicted RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 CYP21A2P08686 494 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 NPR3P17342 541 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SFPQP23246 707 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SMC1AQ14683 1233 aaKnown RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 UBE3CQ15386 1083 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 LRRFIP1Q32MZ4 808 aaKnown RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 NAA16Q6N069 864 aaPredicted RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 C1orf228Q6PIY5 440 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SRLQ86TD4 932 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 CERS5Q8N5B7 392 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 GIMAP8Q8ND71 665 aaPredicted RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 PGBD1Q96JS3 809 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 PIM2Q9P1W9 311 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 DNAI1Q9UI46 699 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 AK5Q9Y6K8 562 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SCN9AQ15858 1988 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 G3V3G9 751 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 DGKGP49619 791 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 C11orf57Q6ZUT1 292 aaPredicted RBP10.4□□□□□ -0.74
SNHG3-201ENST00000413987 C15orf52Q6ZUT6 534 aaKnown RBP10.4□□□□□ -0.74
SNHG3-201ENST00000413987 DZIP1Q86YF9 867 aaKnown RBP10.4□□□□□ -0.74
SNHG3-201ENST00000413987 C10orf67Q8IYJ2 551 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 GPR161Q8N6U8 529 aaKnown RBP10.4□□□□□ -0.74
SNHG3-201ENST00000413987 EPB41L4AQ9HCS5 686 aaPredicted RBP10.4□□□□□ -0.74
SNHG3-201ENST00000413987 INCENPQ9NQS7 918 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 AASDHPPTQ9NRN7 309 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 ZNF180Q9UJW8 692 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 AFG3L2Q9Y4W6 797 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 ADGRG1Q9Y653 693 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 ADAMTSL1Q8N6G6 1762 aa10.4□□□□□ -0.74
SNHG3-201ENST00000413987 PPIP5K2O43314 1243 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 ECE2O60344 883 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 TADA3O75528 432 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 DKK1O94907 266 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 PFKPQ01813 784 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 TM4SF20Q53R12 229 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 CDCA2Q69YH5 1023 aaPredicted RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 ATL3Q6DD88 541 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 LEKR1Q6ZMV7 388 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 STOX1Q6ZVD7 989 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 DHX40Q8IX18 779 aaKnown RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 NECAB1Q8N987 351 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 GIMAP1Q8WWP7 306 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 GINM1Q9NU53 330 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 PPP1R9AQ9ULJ8 1098 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 PCDHGB3Q9Y5G1 929 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 ATF7P17544 494 aaPredicted RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 ACTN2P35609 894 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 SCNN1DP51172 638 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 GTF2A2P52657 109 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 TGFB2P61812 414 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 ALG1LQ6GMV1 187 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 HIBCHQ6NVY1 386 aaPredicted RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 UNC5DQ6UXZ4 953 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 KCT2Q8NC54 265 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 FHDC1Q9C0D6 1143 aaPredicted RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 ARFGAP3Q9NP61 516 aa10.39□□□□□ -0.75
SNHG3-201ENST00000413987 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 PNMA8BQ9ULN7 279 aaPredicted RBP10.39□□□□□ -0.75
SNHG3-201ENST00000413987 BRCA1P38398 1863 aaKnown RBP10.38□□□□□ -0.75
SNHG3-201ENST00000413987 CYP2D7A0A087X1C5 515 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 J3KRW8 73 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 KINO60870 393 aaKnown RBP10.38□□□□□ -0.75
SNHG3-201ENST00000413987 TMCC2O75069 709 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 TBC1D8O95759 1140 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 NEFHP12036 1026 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 TBX2Q13207 712 aaPredicted RBP10.38□□□□□ -0.75
SNHG3-201ENST00000413987 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 FCHSD1Q86WN1 690 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 AFAP1L1Q8TED9 768 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 BPIFA3Q9BQP9 254 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 RIOK1Q9BRS2 568 aaKnown RBP10.38□□□□□ -0.75
SNHG3-201ENST00000413987 LRRC2Q9BYS8 371 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 COA1Q9GZY4 146 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 SPON1Q9HCB6 807 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 SLC4A4Q9Y6R1 1079 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 MAGEB6P1A0A0J9YX57 407 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 PNMA6FA0A0J9YX94 578 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 RAD17O75943 681 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 FBXO45P0C2W1 286 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 RESTQ13127 1097 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 BLOC1S2Q6QNY1 142 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 ZFATQ9P243 1243 aa10.38□□□□□ -0.75
SNHG3-201ENST00000413987 E2F8A0AVK6 867 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 GSG1L2A8MUP6 293 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 ZSCAN12O43309 604 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 RPS6KA5O75582 802 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 SMC2O95347 1197 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 SETSIPP0DME0 302 aa10.37□□□□□ -0.75
SNHG3-201ENST00000413987 GUCY2CP25092 1073 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms