RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 ZC3H18Q86VM9 953 aaKnown RBP5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 DLG3Q92796 817 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 SIGLEC10Q96LC7 697 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 SLC38A3Q99624 504 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 BOCQ9BWV1 1114 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 CAAP1Q9H8G2 361 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 CD320Q9NPF0 282 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 B3GALT1Q9Y5Z6 326 aa5.47□□□□□ -1.53
HMGB1P11-201ENST00000413899 FAM90A27PA6NNH2 459 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 ACOT7O00154 380 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 BUB1BO60566 1050 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 LTFP02788 710 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 PTPN1P18031 435 aaKnown RBP5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 SOX5P35711 763 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 TXKP42681 527 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 NCKAP1LP55160 1127 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 DSG1Q02413 1049 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 DHCR24Q15392 516 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 SEPT7Q16181 437 aaKnown RBP5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 PAN2Q504Q3 1202 aaKnown RBP5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 RNF187Q5TA31 235 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 PKN3Q6P5Z2 889 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 EP400NLQ6ZTU2 488 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 RBM12BQ8IXT5 1001 aaKnown RBP5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 CHAC2Q8WUX2 184 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 SPC25Q9HBM1 224 aa5.46□□□□□ -1.54
HMGB1P11-201ENST00000413899 PTPDC1A2A3K4 754 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 NFIBO00712 420 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 DNAJC6O75061 913 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 C4BPAP04003 597 aaKnown RBP5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 CYP2C8P10632 490 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 MC3RP41968 323 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 STAT5AP42229 794 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 HERVK_113P62684 666 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 NKX3-2P78367 333 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 FOXO4P98177 505 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 IRF9Q00978 393 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 CAP1Q01518 475 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 SEC23AQ15436 765 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZNF648Q5T619 568 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 BTBD8Q5XKL5 378 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 CREB3L3Q68CJ9 461 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 FSTL4Q6MZW2 842 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 TMEFF1Q8IYR6 380 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 LINC00482Q8N8I6 264 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 YIPF4Q9BSR8 244 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 KCNH7Q9NS40 1196 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 IRAK3Q9Y616 596 aa5.45□□□□□ -1.54
HMGB1P11-201ENST00000413899 TCAF2A6NFQ2 919 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 KCNK3O14649 394 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 C1QTNF9P0C862 333 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 SDHAP31040 664 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 HTRA3P83110 453 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 GRIN1Q05586 938 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 CC2D1AQ6P1N0 951 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 ATG14Q6ZNE5 492 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 DDX46Q7L014 1031 aaKnown RBP5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 PROSER1Q86XN7 944 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 FAM26EQ8N5C1 309 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 OR2W6PQ8NHA6 318 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 SMARCC2Q8TAQ2 1214 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 DDX11Q96FC9 970 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 EPB41L4AQ9HCS5 686 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 IFT57Q9NWB7 429 aa5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 SMG5Q9UPR3 1016 aaKnown RBP5.44□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZNF891A8MT65 544 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 SCDO00767 359 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 DVL2O14641 736 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 HIP1RO75146 1068 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 ATP2A2P16615 1042 aaKnown RBP5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 BPIP17213 487 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 DBPQ10586 325 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 CD300LDQ6UXZ3 194 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 FILIP1Q7Z7B0 1213 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 FAM129CQ86XR2 697 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 AFAP1L2Q8N4X5 818 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 SMC1BQ8NDV3 1235 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 LEO1Q8WVC0 666 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 TMEM209Q96SK2 561 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 RIC8BQ9NVN3 520 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 ZKSCAN5Q9Y2L8 839 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 FAN1Q9Y2M0 1017 aa5.43□□□□□ -1.54
HMGB1P11-201ENST00000413899 H7C1D1 291 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 GAS7O60861 476 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 RAP1GAPP47736 663 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 LSSP48449 732 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 FNTBP49356 437 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 SCNN1BP51168 640 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 ITGA1P56199 1179 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 SSPNQ14714 243 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 CD276Q5ZPR3 534 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 CPZQ66K79 652 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 NXPE1Q8N323 547 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 DTX3Q8N9I9 347 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 KYQ8NBH2 561 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 GORASP1Q9BQQ3 440 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 ACSS2Q9NR19 701 aa5.42□□□□□ -1.54
HMGB1P11-201ENST00000413899 OXSMQ9NWU1 459 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms