RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 AIFM3Q96NN9 605 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 SDF4Q9BRK5 362 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZMYND12Q9H0C1 365 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 GLT8D2Q9H1C3 349 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 AGO4Q9HCK5 861 aaKnown RBP11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 MSRAQ9UJ68 235 aa11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZNF215Q9UL58 517 aaPredicted RBP11.61□□□□□ -0.55
NCKIPSD-202ENST00000413374 MYH6P13533 1939 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 FAM86B1E9PN63 330 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 MEIS1O00470 390 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 NBNO60934 754 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 CTSHP09668 335 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 FAM86B2P0C5J1 330 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 ACTN1P12814 892 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 ATP2A2P16615 1042 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 GNA11P29992 359 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 RFC2P35250 354 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 AK2P54819 239 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 IGBP1P78318 339 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 SCRN1Q12765 414 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 ITGB3BPQ13352 177 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 TMCO2Q7Z6W1 182 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 TRIM22Q8IYM9 498 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 REXO1Q8N1G1 1221 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 PCYT2Q99447 389 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 SLKQ9H2G2 1235 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 ZNF576Q9H609 170 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 JPH1Q9HDC5 661 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 SLC9A2Q9UBY0 812 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 TPCN1Q9ULQ1 816 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 STXBP5LQ9Y2K9 1186 aa11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 YBX2Q9Y2T7 364 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-202ENST00000413374 NID2Q14112 1375 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 ESYT2A0FGR8 921 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 RSPH10B2B2RC85 870 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 PFKMP08237 780 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 RSPH10BP0C881 870 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 ACTR2P61160 394 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 PRR16Q569H4 304 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 TRMT1LQ7Z2T5 733 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 SERINC5Q86VE9 423 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 NECAB1Q8N987 351 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 SLC17A8Q8NDX2 589 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 OSBPL7Q9BZF2 842 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 SMARCAD1Q9H4L7 1026 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 AZI2Q9H6S1 392 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 KCNJ14Q9UNX9 436 aa11.59□□□□□ -0.55
NCKIPSD-202ENST00000413374 DEXIO95424 95 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 CYP3A4P08684 503 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 GNAT1P11488 350 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 PPFIA1Q13136 1202 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 MBTPS1Q14703 1052 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 RUFY4Q6ZNE9 571 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 CCDC148Q8NFR7 591 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 GJA10Q969M2 543 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 ZNF577Q9BSK1 485 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 PRDM12Q9H4Q4 367 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 CERS4Q9HA82 394 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 SLC28A3Q9HAS3 691 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 GJB4Q9NTQ9 266 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 ERAP1Q9NZ08 941 aa11.58□□□□□ -0.56
NCKIPSD-202ENST00000413374 IGLV3-22A0A075B6J6 115 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 BACH1O14867 736 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 EDIL3O43854 480 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 PFKFB2O60825 505 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 CCNE2O96020 404 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 INSRRP14616 1297 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 FOSL2P15408 326 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 KCNJ6P48051 423 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 STAT5BP51692 787 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 NEK4P51957 841 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 ANAPC15P60006 121 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 ADAM17P78536 824 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 RBL2Q08999 1139 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 PLCB4Q15147 1175 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 RAB30Q15771 203 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 GRIK4Q16099 956 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 SWSAP1Q6NVH7 229 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 FAM117BQ6P1L5 589 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 CNKSR3Q6P9H4 555 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 DBF4BQ8NFT6 615 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 TBCKQ8TEA7 893 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 TRAPPC12Q8WVT3 735 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 CRYGNQ8WXF5 182 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 PPM1EQ8WY54 764 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 PCDHA4Q9UN74 947 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 NFASCO94856 1347 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 NRCAMQ92823 1304 aa11.57□□□□□ -0.56
NCKIPSD-202ENST00000413374 RFXAPO00287 272 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 DHX15O43143 795 aaKnown RBP11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 LGR5O75473 907 aa11.56□□□□□ -0.56
NCKIPSD-202ENST00000413374 LARGE1O95461 756 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms