RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 MAGEA1P43355 309 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 GPS2Q13227 327 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 ADAM9Q13443 819 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 SMCR8Q8TEV9 937 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 LENG9Q96B70 501 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 HERC5Q9UII4 1024 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 FAM86B1E9PN63 330 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 POLR3GO15318 223 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 FAM86B2P0C5J1 330 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 OAS2P29728 719 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 USP14P54578 494 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 RAD51AP2Q09MP3 1159 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 ZC3H3Q8IXZ2 948 aaKnown RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 KCTD17Q8N5Z5 321 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 TMOD2Q9NZR1 351 aa12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 COL2A1P02458 1487 aaPredicted RBP12.68□□□□□ -0.38
TRAFD1-202ENST00000412615 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 CYP3A4P08684 503 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 SPATA31C1P0DKV0 1188 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 CHRNA5P30532 468 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 ZNF76P36508 570 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 JAG1P78504 1218 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 GIT2Q14161 759 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 SLC9C1Q4G0N8 1177 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 CAGE1Q8TC20 777 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 ALS2CR12Q96Q35 445 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 PRR12Q9ULL5 1215 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 A0A1W2PRG0 241 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 MSH4O15457 936 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 PJA2O43164 708 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 PRLRP16471 622 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 KCNA4P22459 653 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 EPS15P42566 896 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.385e-7■■■■■ 26.8
TRAFD1-202ENST00000412615 ASTE1Q2TB18 679 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 FAM83BQ5T0W9 1011 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 SFMBT2Q5VUG0 894 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 CAPZA3Q96KX2 299 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 NLRC4Q9NPP4 1024 aa12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
TRAFD1-202ENST00000412615 MEIS1O00470 390 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 SERPING1P05155 500 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 HOXA13P31271 388 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 STAT2P52630 851 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 PSMC6P62333 389 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 LUC7LQ9NQ29 371 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 SNX12Q9UMY4 172 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 TRAF3IP3Q9Y228 551 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 SLX4Q8IY92 1834 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 OPLAHO14841 1288 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 PPIP5K2O43314 1243 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 NOL4O94818 638 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 NR2F2P24468 414 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 RRP1BQ14684 758 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 TDRD12Q587J7 1177 aaKnown RBP12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 HGSNATQ68CP4 663 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
TRAFD1-202ENST00000412615 RBAK-RBAKDNI3L0D1 243 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 MOCS3O95396 460 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 POLR2FP61218 127 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 MAP9Q49MG5 647 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 RNF10Q8N5U6 811 aaKnown RBP12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 REEP2Q9BRK0 252 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 VAV3Q9UKW4 847 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 CAPN6Q9Y6Q1 641 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 YDJCA8MPS7 323 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 PDXKO00764 312 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 CALUO43852 315 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 GFPT1Q06210 699 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 KCNH2Q12809 1159 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 EPM2AIP1Q7L775 607 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 FRMD5Q7Z6J6 570 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
TRAFD1-202ENST00000412615 ZNF185O15231 689 aa12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 EYA4O95677 639 aa12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 TCP1P17987 556 aaKnown RBP12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 CASP8Q14790 479 aa12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 ZNF772Q68DY9 489 aaPredicted RBP12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 SFR1Q86XK3 245 aa12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 EIF2AK1Q9BQI3 630 aaKnown RBP12.65□□□□□ -0.39
TRAFD1-202ENST00000412615 CRACR2AQ9BSW2 395 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms