RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 NFASCO94856 1347 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 PTPRSQ13332 1948 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 C17orf102A2RUQ5 167 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 SMIM10L2AP0DMW4 78 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 SMIM10L2BP0DMW5 78 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 NPY5RQ15761 445 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 CCDC155Q8N6L0 562 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 CAGE1Q8TC20 777 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 VWCEQ96DN2 955 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 UIMC1Q96RL1 719 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 C22orf23Q9BZE7 217 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 RNPEPQ9H4A4 650 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 KCNJ14Q9UNX9 436 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 MYO9BQ13459 2157 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 DDX39AO00148 427 aaKnown RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 FGBP02675 491 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 IQCF3P0C7M6 154 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 PTK7Q13308 1070 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 DEFB128Q7Z7B8 93 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 RPUSD2Q8IZ73 545 aaKnown RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 FAM177A1Q8N128 213 aaPredicted RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 DAGLBQ8NCG7 672 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 WNT8BQ93098 351 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 KIF2CQ99661 725 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 ORC3Q9UBD5 711 aaPredicted RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 SIP14410 1827 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 M0R2N6 131 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 EDIL3O43854 480 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 ACTR2P61160 394 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 GPR153Q6NV75 609 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 GLG1Q92896 1179 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 ATP6V0A1Q93050 837 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 GJB4Q9NTQ9 266 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 SETD4Q9NVD3 440 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 TREHO43280 583 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
TRIM56-202ENST00000412507 HOXC8P31273 242 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 CIITAP33076 1130 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 PRR16Q569H4 304 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 RASIP1Q5U651 963 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 GALNT17Q6IS24 598 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 OTOP2Q7RTS6 562 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 TBCKQ8TEA7 893 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 HERVK_113Q902F9 699 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 PCYT2Q99447 389 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 ZNF577Q9BSK1 485 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 PHF20Q9BVI0 1012 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 SMARCAD1Q9H4L7 1026 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 MICAL3Q7RTP6 2002 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 EMSYQ7Z589 1322 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 IPO5O00410 1097 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 DHX15O43143 795 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 LGR5O75473 907 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 CKBP12277 381 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 SELPP16109 830 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 XBP1P17861 261 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 MARK3P27448 753 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 RFC2P35250 354 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 RBM25P49756 843 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 USP11P51784 963 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 SETQ01105 290 aaPredicted RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 RBL2Q08999 1139 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 ST3GAL1Q11201 340 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 TRIM71Q2Q1W2 868 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 Q7L0L9 218 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 LRRC8DQ7L1W4 858 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 SERINC5Q86VE9 423 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 NSUN7Q8NE18 718 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 ERAP1Q9NZ08 941 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 CXXC1Q9P0U4 656 aaPredicted RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 CCNE2O96020 404 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 SMAD3P84022 425 aaKnown RBP21.39■■□□□ 1.01
TRIM56-202ENST00000412507 FAM109BQ6ICB4 259 aaPredicted RBP21.39■■□□□ 1.01
TRIM56-202ENST00000412507 LMBR1Q8WVP7 490 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 WASF1Q92558 559 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 LENG9Q96B70 501 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 AZI2Q9H6S1 392 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 LIMCH1Q9UPQ0 1083 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 JAK2O60674 1132 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 ATG7O95352 703 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 PFKMP08237 780 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 GNAT1P11488 350 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 ADAM17P78536 824 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 ZNF618Q5T7W0 954 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 DEFB123Q8N688 67 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 FTOQ9C0B1 505 aaKnown RBP eCLIP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 MTIF3Q9H2K0 278 aaKnown RBP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 TBC1D22BQ9NU19 505 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 NRCAMQ92823 1304 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 GRXCR1A8MXD5 290 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 RBAK-RBAKDNI3L0D1 243 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 PPFIA1Q13136 1202 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 GPNMBQ14956 572 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 NONOQ15233 471 aaKnown RBP eCLIP21.37■■□□□ 1.01
TRIM56-202ENST00000412507 TRAF7Q6Q0C0 670 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 ABHD15Q6UXT9 468 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms