RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 NFASCO94856 1347 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 PTPRSQ13332 1948 aa21.45■■□□□ 1.02
TRIM56-202ENST00000412507 C17orf102A2RUQ5 167 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 SMIM10L2AP0DMW4 78 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 SMIM10L2BP0DMW5 78 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 NPY5RQ15761 445 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 CCDC155Q8N6L0 562 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 CAGE1Q8TC20 777 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 VWCEQ96DN2 955 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 UIMC1Q96RL1 719 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 C22orf23Q9BZE7 217 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 RNPEPQ9H4A4 650 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 KCNJ14Q9UNX9 436 aa21.44■■□□□ 1.02
TRIM56-202ENST00000412507 MYO9BQ13459 2157 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 DDX39AO00148 427 aaKnown RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 FGBP02675 491 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 IQCF3P0C7M6 154 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 PTK7Q13308 1070 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 DEFB128Q7Z7B8 93 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 RPUSD2Q8IZ73 545 aaKnown RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 FAM177A1Q8N128 213 aaPredicted RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 DAGLBQ8NCG7 672 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 WNT8BQ93098 351 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 KIF2CQ99661 725 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 ORC3Q9UBD5 711 aaPredicted RBP21.43■■□□□ 1.02
TRIM56-202ENST00000412507 SIP14410 1827 aa21.43■■□□□ 1.02
TRIM56-202ENST00000412507 M0R2N6 131 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 EDIL3O43854 480 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 ACTR2P61160 394 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 GPR153Q6NV75 609 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 GLG1Q92896 1179 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 ATP6V0A1Q93050 837 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 GJB4Q9NTQ9 266 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 SETD4Q9NVD3 440 aa21.42■■□□□ 1.02
TRIM56-202ENST00000412507 TREHO43280 583 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
TRIM56-202ENST00000412507 HOXC8P31273 242 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 CIITAP33076 1130 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 PRR16Q569H4 304 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 RASIP1Q5U651 963 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 GALNT17Q6IS24 598 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 OTOP2Q7RTS6 562 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 TBCKQ8TEA7 893 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 HERVK_113Q902F9 699 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 PCYT2Q99447 389 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 ZNF577Q9BSK1 485 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 PHF20Q9BVI0 1012 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 SMARCAD1Q9H4L7 1026 aa21.41■■□□□ 1.02
TRIM56-202ENST00000412507 MICAL3Q7RTP6 2002 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 EMSYQ7Z589 1322 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 IPO5O00410 1097 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 DHX15O43143 795 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 LGR5O75473 907 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 CKBP12277 381 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 SELPP16109 830 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 XBP1P17861 261 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 MARK3P27448 753 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 RFC2P35250 354 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 RBM25P49756 843 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 USP11P51784 963 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 SETQ01105 290 aaPredicted RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 RBL2Q08999 1139 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 ST3GAL1Q11201 340 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 TRIM71Q2Q1W2 868 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 Q7L0L9 218 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 LRRC8DQ7L1W4 858 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 SERINC5Q86VE9 423 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 NSUN7Q8NE18 718 aaKnown RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 ERAP1Q9NZ08 941 aa21.4■■□□□ 1.02
TRIM56-202ENST00000412507 CXXC1Q9P0U4 656 aaPredicted RBP21.4■■□□□ 1.02
TRIM56-202ENST00000412507 CCNE2O96020 404 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 SMAD3P84022 425 aaKnown RBP21.39■■□□□ 1.01
TRIM56-202ENST00000412507 FAM109BQ6ICB4 259 aaPredicted RBP21.39■■□□□ 1.01
TRIM56-202ENST00000412507 LMBR1Q8WVP7 490 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 WASF1Q92558 559 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 LENG9Q96B70 501 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 AZI2Q9H6S1 392 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 LIMCH1Q9UPQ0 1083 aa21.39■■□□□ 1.01
TRIM56-202ENST00000412507 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 JAK2O60674 1132 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 ATG7O95352 703 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 PFKMP08237 780 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 GNAT1P11488 350 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 ADAM17P78536 824 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 ZNF618Q5T7W0 954 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 DEFB123Q8N688 67 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 FTOQ9C0B1 505 aaKnown RBP eCLIP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 MTIF3Q9H2K0 278 aaKnown RBP21.38■■□□□ 1.01
TRIM56-202ENST00000412507 TBC1D22BQ9NU19 505 aa21.38■■□□□ 1.01
TRIM56-202ENST00000412507 NRCAMQ92823 1304 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 GRXCR1A8MXD5 290 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 RBAK-RBAKDNI3L0D1 243 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 PPFIA1Q13136 1202 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 GPNMBQ14956 572 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 NONOQ15233 471 aaKnown RBP eCLIP21.37■■□□□ 1.01
TRIM56-202ENST00000412507 TRAF7Q6Q0C0 670 aa21.37■■□□□ 1.01
TRIM56-202ENST00000412507 ABHD15Q6UXT9 468 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms