RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 SMIM10L2AP0DMW4 78 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 SMIM10L2BP0DMW5 78 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 GNAT2P19087 354 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 BECN1Q14457 450 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 ANGPT1Q15389 498 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 ST3GAL2Q16842 350 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 USH1GQ495M9 461 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 VN1R2Q8NFZ6 395 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 ATP8B4Q8TF62 1192 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 SPATA33Q96N06 139 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 TAAR1Q96RJ0 339 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 RMDN3Q96TC7 470 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 SEMA4AQ9H3S1 761 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 SMOC2Q9H3U7 446 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 UPF2Q9HAU5 1272 aaKnown RBP8.09□□□□□ -1.11
LSM8-202ENST00000411938 RC3H2Q9HBD1 1191 aaKnown RBP8.09□□□□□ -1.11
LSM8-202ENST00000411938 DDX19BQ9UMR2 479 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 NR2E1Q9Y466 385 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 PCDHB15Q9Y5E8 787 aa8.09□□□□□ -1.11
LSM8-202ENST00000411938 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 EIF3JO75822 258 aaKnown RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 GHRP10912 638 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 HOXD8P13378 290 aaPredicted RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 EIF2AK2P19525 551 aaKnown RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 TECP42680 631 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 HDAC1Q13547 482 aaPredicted RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 HSDL1Q3SXM5 330 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 PAN2Q504Q3 1202 aaKnown RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 ARHGEF16Q5VV41 709 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 ANKRD54Q6NXT1 300 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 CCDC105Q8IYK2 499 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 CMTR2Q8IYT2 770 aaKnown RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 IFNL3Q8IZI9 196 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 RGS22Q8NE09 1264 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 CYP2W1Q8TAV3 490 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 SYTL5Q8TDW5 730 aaPredicted RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 TBC1D5Q92609 795 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 APPBP2Q92624 585 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 ZNF689Q96CS4 500 aaPredicted RBP8.08□□□□□ -1.12
LSM8-202ENST00000411938 IWS1Q96ST2 819 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 C16orf70Q9BSU1 422 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 S1PR5Q9H228 398 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 RNPEPQ9H4A4 650 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 IL17RBQ9NRM6 502 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 DLL3Q9NYJ7 618 aa8.08□□□□□ -1.12
LSM8-202ENST00000411938 MYH7P12883 1935 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 WDR19Q8NEZ3 1342 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 TTC3P53804 2025 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 C2CD4DB7Z1M9 353 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 PATL2C9JE40 543 aaKnown RBP8.07□□□□□ -1.12
LSM8-202ENST00000411938 H3BRB1 525 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 PI15O43692 258 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 RANBP6O60518 1105 aaKnown RBP8.07□□□□□ -1.12
LSM8-202ENST00000411938 GGPS1O95749 300 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 ASGR2P07307 311 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 NR3C2P08235 984 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 GNAT1P11488 350 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 PPARAQ07869 468 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 DUSP6Q16828 381 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 RSPO4Q2I0M5 234 aaPredicted RBP8.07□□□□□ -1.12
LSM8-202ENST00000411938 FAM26DQ5JW98 314 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 MYSM1Q5VVJ2 828 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 LLGL2Q6P1M3 1020 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 SYCE2Q6PIF2 218 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 DTWD2Q8NBA8 298 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 CDCA3Q99618 268 aaPredicted RBP8.07□□□□□ -1.12
LSM8-202ENST00000411938 NAPBQ9H115 298 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 TUT1Q9H6E5 874 aaKnown RBP8.07□□□□□ -1.12
LSM8-202ENST00000411938 SETD4Q9NVD3 440 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 COL20A1Q9P218 1284 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 R4GN57 208 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 ZFYVE26Q68DK2 2539 aa8.07□□□□□ -1.12
LSM8-202ENST00000411938 CFAP47Q6ZTR5 3102 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 MYH7BA7E2Y1 1941 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 M0R2C6 588 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 RNF113AO15541 343 aaKnown RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 CHRNA1P02708 482 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 TOP1P11387 765 aaKnown RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 HOXB8P17481 243 aaPredicted RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 AOC1P19801 751 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 HOXC8P31273 242 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 ARHGAP4P98171 946 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 COL9A2Q14055 689 aaPredicted RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 LPIN1Q14693 890 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 CELF3Q5SZQ8 465 aaKnown RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 SPOUT1Q5T280 376 aaKnown RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 CWF19L1Q69YN2 538 aaKnown RBP8.06□□□□□ -1.12
LSM8-202ENST00000411938 CES5AQ6NT32 575 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 DCLK2Q8N568 766 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 RUBCNQ92622 972 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 CHAMP1Q96JM3 812 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 TBC1D32Q96NH3 1257 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 MLXIPQ9HAP2 919 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 LIMD1Q9UGP4 676 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 CDH22Q9UJ99 828 aa8.06□□□□□ -1.12
LSM8-202ENST00000411938 PCDHB12Q9Y5F1 795 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms