RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NSUN3Q9H649 340 aaKnown RBP19.26■□□□□ 0.67
MRPL55-220ENST00000411464 COL4A4P53420 1690 aaPredicted RBP19.26■□□□□ 0.67
MRPL55-220ENST00000411464 KIF5BP33176 963 aa19.25■□□□□ 0.67
MRPL55-220ENST00000411464 TTC22Q5TAA0 569 aa19.25■□□□□ 0.67
MRPL55-220ENST00000411464 TAF2Q6P1X5 1199 aa19.25■□□□□ 0.67
MRPL55-220ENST00000411464 RSPH3Q86UC2 560 aa19.25■□□□□ 0.67
MRPL55-220ENST00000411464 CTCFLQ8NI51 663 aaPredicted RBP19.25■□□□□ 0.67
MRPL55-220ENST00000411464 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
MRPL55-220ENST00000411464 PRR33A8MZF0 331 aa19.24■□□□□ 0.67
MRPL55-220ENST00000411464 PIK3CDO00329 1044 aa19.24■□□□□ 0.67
MRPL55-220ENST00000411464 NCK2O43639 380 aa19.24■□□□□ 0.67
MRPL55-220ENST00000411464 CHRNA1P02708 482 aa19.24■□□□□ 0.67
MRPL55-220ENST00000411464 GSPT1P15170 499 aaKnown RBP19.24■□□□□ 0.67
MRPL55-220ENST00000411464 TCF7P36402 384 aaPredicted RBP19.24■□□□□ 0.67
MRPL55-220ENST00000411464 IGDCC4Q8TDY8 1250 aa19.24■□□□□ 0.67
MRPL55-220ENST00000411464 TELO2Q9Y4R8 837 aa19.24■□□□□ 0.67
MRPL55-220ENST00000411464 MEIS2O14770 477 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 RB1P06400 928 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 GHRP10912 638 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 CHMLP26374 656 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 CTNNB1P35222 781 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 CSPP1Q1MSJ5 1256 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 RPAINQ86UA6 219 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 SEPT1Q8WYJ6 367 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 CDHR1Q96JP9 859 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 UIMC1Q96RL1 719 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 MAP3K14Q99558 947 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 LZTS2Q9BRK4 669 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 C11orf84Q9BUA3 381 aaPredicted RBP19.23■□□□□ 0.67
MRPL55-220ENST00000411464 SPZ1Q9BXG8 430 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 CLDND1Q9NY35 253 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 RWDD3Q9Y3V2 267 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 TAF6LQ9Y6J9 622 aa19.23■□□□□ 0.67
MRPL55-220ENST00000411464 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 BMPR1AP36894 532 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 PPFIA1Q13136 1202 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 COL19A1Q14993 1142 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 RUFY4Q6ZNE9 571 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 ZNF654Q8IZM8 581 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 GLG1Q92896 1179 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 GPRASP2Q96D09 838 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 PSTPIP2Q9H939 334 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 EHMT1Q9H9B1 1298 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 ERAP1Q9NZ08 941 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 PRKAG3Q9UGI9 489 aa19.22■□□□□ 0.67
MRPL55-220ENST00000411464 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
MRPL55-220ENST00000411464 C5orf67F2Z3F1 127 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 ENPP3O14638 875 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 DDAH1O94760 285 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 PDE4AP27815 886 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 GNAQP50148 359 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 ANTXR2P58335 489 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 GRIK4Q16099 956 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 MYL10Q9BUA6 226 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 LMAN2LQ9H0V9 348 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 TUBE1Q9UJT0 475 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 MYH7BA7E2Y1 1941 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 MYH6P13533 1939 aa19.21■□□□□ 0.67
MRPL55-220ENST00000411464 DCXO43602 365 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 ATP9AO75110 1047 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 MARK3P27448 753 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 LPIN1Q14693 890 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 CASC1Q6TDU7 716 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 NFXL1Q6ZNB6 911 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 MB21D2Q8IYB1 491 aaPredicted RBP19.2■□□□□ 0.66
MRPL55-220ENST00000411464 TMTC2Q8N394 836 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 SMARCAD1Q9H4L7 1026 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 LY9Q9HBG7 655 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 SIP14410 1827 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 ADGRA3Q8IWK6 1321 aa19.2■□□□□ 0.66
MRPL55-220ENST00000411464 BRWD1Q9NSI6 2320 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 GSTTP1A0A1W2PQM5 241 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 SGSM2O43147 1006 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 KCNA2P16389 499 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 ITGB5P18084 799 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 ZP2Q05996 745 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 MGAT3Q09327 533 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 MTMR1Q13613 665 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 BTG3Q14201 252 aaPredicted RBP19.19■□□□□ 0.66
MRPL55-220ENST00000411464 ADHFE1Q8IWW8 467 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 DNAJB3Q8WWF6 145 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 MAP4K1Q92918 833 aa19.19■□□□□ 0.66
MRPL55-220ENST00000411464 CLP1Q92989 425 aaKnown RBP19.19■□□□□ 0.66
MRPL55-220ENST00000411464 YTHDC1Q96MU7 727 aaKnown RBP19.19■□□□□ 0.66
MRPL55-220ENST00000411464 UPF3BQ9BZI7 483 aaKnown RBP19.19■□□□□ 0.66
MRPL55-220ENST00000411464 MBLAC1A4D2B0 266 aaPredicted RBP19.18■□□□□ 0.66
MRPL55-220ENST00000411464 CCDC69A6NI79 296 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 GRM6O15303 877 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 RPLP2P05387 115 aaKnown RBP19.18■□□□□ 0.66
MRPL55-220ENST00000411464 FBXO47Q5MNV8 452 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 TSHZ1Q6ZSZ6 1077 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 SRBD1Q8N5C6 995 aaKnown RBP19.18■□□□□ 0.66
MRPL55-220ENST00000411464 MTA3Q9BTC8 594 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 PKD2L1Q9P0L9 805 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 CDY2AQ9Y6F7 541 aa19.18■□□□□ 0.66
MRPL55-220ENST00000411464 COL4A6Q14031 1691 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 POTEB3A0JP26 581 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 SPDYE3A6NKU9 549 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 MAFGO15525 162 aa19.17■□□□□ 0.66
MRPL55-220ENST00000411464 PRC1O43663 620 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms