RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 TSR2Q969E8 191 aaKnown RBP5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 ELF4Q99607 663 aaPredicted RBP5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 TCF7L1Q9HCS4 588 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 VTA1Q9NP79 307 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 AASDHPPTQ9NRN7 309 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 KCNH7Q9NS40 1196 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 FBLN5Q9UBX5 448 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 ATP23Q9Y6H3 246 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
RNU2-28P-201ENST00000410457 HGSO14964 777 aaPredicted RBP5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 KIF3BO15066 747 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 TADA3O75528 432 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 RFPL1O75677 317 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 KRT37O76014 449 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 CFBP00751 764 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 GLI4P10075 376 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 PRKCAP17252 672 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 SLC9A1P19634 815 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 FUT4P22083 530 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 KIF11P52732 1056 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 PTPN21Q16825 1174 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 ABCB5Q2M3G0 1257 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 STEAP3Q658P3 488 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 NXNQ6DKJ4 435 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 FSTL4Q6MZW2 842 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 SLC23A3Q6PIS1 610 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 KCTD1Q719H9 257 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 DTX1Q86Y01 620 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 CHPFQ8IZ52 775 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 NETO2Q8NC67 525 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 NUP43Q8NFH3 380 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 FUBP3Q96I24 572 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 PLCD4Q9BRC7 762 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 KRTAP4-9Q9BYQ8 210 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 SMOC1Q9H4F8 434 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 ZNF652Q9Y2D9 606 aa5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 ARID1BQ8NFD5 2236 aaPredicted RBP5.41□□□□□ -1.54
RNU2-28P-201ENST00000410457 CCDC194A0A1B0GVG4 234 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 TRIM75PA6NK02 468 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 KIAA1324LA8MWY0 1029 aaPredicted RBP5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 FZD9O00144 591 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 PRC1O43663 620 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 HPXP02790 462 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 NTRK1P04629 796 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 SPINK2P20155 84 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 SDHAP31040 664 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 IARSP41252 1262 aaKnown RBP5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 FNTBP49356 437 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 SNX17Q15036 470 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 LRRC41Q15345 812 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 TMEM240Q5SV17 173 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 ZNF574Q6ZN55 896 aaPredicted RBP5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 TCEAL8Q8IYN2 117 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 LILRA2Q8N149 483 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 SEC14L1Q92503 715 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 RTFDC1Q9BY42 306 aaPredicted RBP5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 CD244Q9BZW8 370 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 ZDHHC5Q9C0B5 715 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 ZMAT4Q9H898 229 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 LUC7LQ9NQ29 371 aaKnown RBP5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 TOMM22Q9NS69 142 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 C14orf119Q9NWQ9 140 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 USP36Q9P275 1121 aaKnown RBP5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 CCDC39Q9UFE4 941 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 ZNF180Q9UJW8 692 aa5.4□□□□□ -1.54
RNU2-28P-201ENST00000410457 A0A1W2PQJ5 194 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 SCDO00767 359 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 KCNK3O14649 394 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 SRGAP3O43295 1099 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 U2AF1L5P0DN76 240 aaPredicted RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 MYBL2P10244 700 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 RBP3P10745 1247 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 TACR1P25103 407 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 CD40P25942 277 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 GDNFP39905 211 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 CD97P48960 835 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 HK2P52789 917 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 CYP4F8P98187 520 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 U2AF1Q01081 240 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 HLTFQ14527 1009 aaKnown RBP eCLIP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 EPHA7Q15375 998 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 FAM102BQ5T8I3 360 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 CPZQ66K79 652 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 CCSAPQ6IQ19 270 aaPredicted RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 NLRX1Q86UT6 975 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 NME9Q86XW9 330 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 WDR75Q8IWA0 830 aaKnown RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 TRIM48Q8IWZ4 208 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 MYO1HQ8N1T3 1032 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 C1orf162Q8NEQ5 155 aaPredicted RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 RHOBTB2Q9BYZ6 727 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 AP5M1Q9H0R1 490 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 SP110Q9HB58 689 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 MYOTQ9UBF9 498 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 ASH2LQ9UBL3 628 aa5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 LUC7L2Q9Y383 392 aaKnown RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 NOC2LQ9Y3T9 749 aaKnown RBP5.39□□□□□ -1.55
RNU2-28P-201ENST00000410457 SNUPNO95149 360 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms