RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 SH3BP5LQ7L8J4 393 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SLFN12Q8IYM2 578 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SLC30A5Q8TAD4 765 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SEC14L1Q92503 715 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GJD4Q96KN9 370 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 TSG101Q99816 390 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 PAGR1Q9BTK6 254 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 LRRC1Q9BTT6 524 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 POLR3CQ9BUI4 534 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 STRA6Q9BX79 667 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 DEFB129Q9H1M3 183 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ACBD3Q9H3P7 528 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 USP20Q9Y2K6 914 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GRIN2DO15399 1336 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ATXN2Q99700 1313 aaKnown RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 ZMYM2Q9UBW7 1377 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 A0A0A6YYK5 440 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 TOM1O60784 492 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 MUTP22033 750 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 RPA1P27694 616 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GGCXP38435 758 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SLC1A4P43007 532 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 NPEPPSP55786 919 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GFPT1Q06210 699 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 EPHA7Q15375 998 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 EZH2Q15910 746 aaKnown RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 UBE2SQ16763 222 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FAM26FQ5R3K3 315 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 B3GNT9Q6UX72 402 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 RRAGAQ7L523 313 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SRLQ86TD4 932 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 IQCKQ8N0W5 287 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 LRRC47Q8N1G4 583 aaKnown RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 RASGEF1CQ8N431 466 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SCFD2Q8WU76 684 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 DHX36Q9H2U1 1008 aaKnown RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 PSTPIP2Q9H939 334 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 DMGDHQ9UI17 866 aaKnown RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 DAAM1Q9Y4D1 1078 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ERICH4A6NGS2 130 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SRRM3A6NNA2 597 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 PDXKO00764 312 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 CPP00450 1065 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ECHS1P30084 290 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 MAGEA1P43355 309 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 EPHB4P54760 987 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SFMBT2Q5VUG0 894 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 NFRKBQ6P4R8 1299 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 DYMQ7RTS9 669 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 CATSPER3Q86XQ3 398 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FIZ1Q96SL8 496 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 MXD3Q9BW11 206 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 TSPYL1Q9H0U9 437 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FAM204AQ9H8W3 233 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 STIM2Q9P246 746 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FAM198AQ9UFP1 575 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FEZ2Q9UHY8 353 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 USP21Q9UK80 565 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 TTC7AQ9ULT0 858 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 PCDHA12Q9UN75 941 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 IGLV3-22A0A075B6J6 115 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 MACROD2A1Z1Q3 448 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GOLGA8KD6RF30 607 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 E9PMD0 336 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GFPT2O94808 682 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 LRRC41Q15345 812 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 CCDC96Q2M329 555 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 QRICH1Q2TAL8 776 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 SLC9C1Q4G0N8 1177 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ZFPM1Q8IX07 1006 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 CCDC65Q8IXS2 484 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 RASSF8Q8NHQ8 419 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ACTRT1Q8TDG2 376 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FAM20AQ96MK3 541 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 NOX5Q96PH1 765 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ALS2CR12Q96Q35 445 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ANO3Q9BYT9 981 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 VAT1LQ9HCJ6 419 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 GPCPD1Q9NPB8 672 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 OLFML3Q9NRN5 406 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 FAM207AQ9NSI2 230 aaPredicted RBP4.26□□□□□ -1.73
RTN4-209ENST00000405240 EMILIN3Q9NT22 766 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 TMEM51Q9NW97 253 aa4.26□□□□□ -1.73
RTN4-209ENST00000405240 ASTN1O14525 1302 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 UBE4BO95155 1302 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 FRMPD4Q14CM0 1322 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 EIF3DO15371 548 aaKnown RBP eCLIP4.25□□□□□ -1.73
RTN4-209ENST00000405240 ZEB2O60315 1214 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 PPFIA4O75335 1185 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CASP5P51878 434 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 ZNF131P52739 623 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 GTF2IP78347 998 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 CDC37Q16543 378 aaPredicted RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 TTMPQ5BVD1 217 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 TSEN2Q8NCE0 465 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 RBM46Q8TBY0 533 aaKnown RBP4.25□□□□□ -1.73
RTN4-209ENST00000405240 AFAP1L1Q8TED9 768 aa4.25□□□□□ -1.73
RTN4-209ENST00000405240 AKT1S1Q96B36 256 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms