RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 RASSF10A6NK89 507 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 SHOX2O60902 331 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 RHOBTB3O94955 611 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ADCY7P51828 1080 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PMS2P54278 862 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 SLC8A3P57103 927 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ITIH3Q06033 890 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 STK4Q13043 487 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PDIA6Q15084 440 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 LLGL1Q15334 1064 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 HPS3Q969F9 1004 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 EDEM3Q9BZQ6 932 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ISCUQ9H1K1 167 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 SLITRK6Q9H5Y7 841 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 TMBIM4Q9HC24 238 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 TBK1Q9UHD2 729 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PIK3C2BO00750 1634 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 GCNT3O95395 438 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 ACSL3O95573 720 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 FAM153BP0C7A2 387 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 RAD23BP54727 409 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 UAP1Q16222 522 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 FAM153CQ494X1 144 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 ANKRD20A8PQ5CZ79 823 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 CCDC174Q6PII3 467 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 ZSCAN29Q8IWY8 852 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 KIF2BQ8N4N8 673 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 LRRC8CQ8TDW0 803 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 STAMBPL1Q96FJ0 436 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 ERGIC2Q96RQ1 377 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 TRIM9Q9C026 710 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 FAM153AQ9UHL3 310 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 LRRC10BA6NIK2 292 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 SNAP23O00161 211 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 TXNDC9O14530 226 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 TTI1O43156 1089 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 CCND1P24385 295 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 KLRC1P26715 233 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 GYG1P46976 350 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 DYNLL1P63167 89 aaKnown RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 TXNRD1Q16881 649 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 FAM47EQ6ZV65 393 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 UNC13DQ70J99 1090 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 PHLDB2Q86SQ0 1253 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 SCYL3Q8IZE3 742 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 USP38Q8NB14 1042 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 GIMAP8Q8ND71 665 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 VCX3BQ9H321 246 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 VCX3AQ9NNX9 186 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 SAP30BPQ9UHR5 308 aaKnown RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 CTDP1Q9Y5B0 961 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 BAZ2BQ9UIF8 2168 aaKnown RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 FERP16591 822 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 ADCY8P40145 1251 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 DDR1Q08345 913 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 MAP7Q14244 749 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 PLS1Q14651 629 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 PFKFB3Q16875 520 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 PITPNM3Q9BZ71 974 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 GPCPD1Q9NPB8 672 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 LARSQ9P2J5 1176 aaKnown RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 PCDHA12Q9UN75 941 aa8.03□□□□□ -1.12
HDAC9-202ENST00000405010 ZBTB12Q9Y330 459 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-202ENST00000405010 A0A087X0B3 334 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 A0A1W2PQJ5 194 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 GFPT2O94808 682 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 BAG2O95816 211 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 IL2RBP14784 551 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 LMNB1P20700 586 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 RWDD2BP57060 319 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 GSTO1P78417 241 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 STRN3Q13033 797 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 MESDQ14696 234 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 SLC18A3Q16572 532 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 RCSD1Q6JBY9 416 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 CEP128Q6ZU80 1094 aa8.02□□□□□ -1.12
HDAC9-202ENST00000405010 PRMT1Q99873 361 aaKnown RBP8.02□□□□□ -1.12
HDAC9-202ENST00000405010 METTL14Q9HCE5 456 aaKnown RBP8.02□□□□□ -1.12
HDAC9-202ENST00000405010 ARPP21Q9UBL0 812 aaPredicted RBP8.02□□□□□ -1.12
HDAC9-202ENST00000405010 RNF225M0QZC1 329 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 OPHN1O60890 802 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 ATP6V1G2O95670 118 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 AFPP02771 609 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 HSPA6P17066 643 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 CACNB1Q02641 598 aaPredicted RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 ANKRD35Q8N283 1001 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 GUF1Q8N442 669 aaKnown RBP8.02□□□□□ -1.13
HDAC9-202ENST00000405010 CEP120Q8N960 986 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 TBCKQ8TEA7 893 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 FBXO41Q8TF61 875 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 SH3GL2Q99962 352 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 VPS37BQ9H9H4 285 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 KANSL2Q9H9L4 492 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 ARHGAP20Q9P2F6 1191 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 DNM3Q9UQ16 869 aa8.02□□□□□ -1.13
HDAC9-202ENST00000405010 PTPRUQ92729 1446 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms