RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 COA1Q9GZY4 146 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 PLCB1Q9NQ66 1216 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 SMARCAL1Q9NZC9 954 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 EHD2Q9NZN4 543 aa11.81□□□□□ -0.52
CLIP4-204ENST00000404424 HLA-DOAP06340 250 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 SHMT1P34896 483 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 GTF2IP78347 998 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 SKOR1P84550 965 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 KCNH2Q12809 1159 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 NELFCDQ8IXH7 590 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 MREGQ8N565 214 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.8□□□□□ -0.52
CLIP4-204ENST00000404424 GANQ9H2C0 597 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 TBC1D7Q9P0N9 293 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 TRAF3IP3Q9Y228 551 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 MYH7BA7E2Y1 1941 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 ATP8B3O60423 1300 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 POTECB2RU33 542 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L10C9JJH3 530 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 SERPINB2P05120 415 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 ANXA13P27216 316 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 SLC12A3P55017 1021 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 AP3B2Q13367 1082 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 IFI16Q16666 785 aaKnown RBP11.8□□□□□ -0.52
CLIP4-204ENST00000404424 KIAA0753Q2KHM9 967 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 EIF1ADQ8N9N8 165 aaKnown RBP11.8□□□□□ -0.52
CLIP4-204ENST00000404424 TSEN2Q8NCE0 465 aaKnown RBP11.8□□□□□ -0.52
CLIP4-204ENST00000404424 NGLY1Q96IV0 654 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 MS4A14Q96JA4 679 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 HINFPQ9BQA5 517 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 FGFBP2Q9BYJ0 223 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 TRIM34Q9BYJ4 488 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 DDX4Q9NQI0 724 aaKnown RBP11.8□□□□□ -0.52
CLIP4-204ENST00000404424 ADAMTS1Q9UHI8 967 aa11.8□□□□□ -0.52
CLIP4-204ENST00000404424 A0A087X0T9 212 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 EIF3HO15372 352 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 HEXIM1O94992 359 aaKnown RBP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 KRT18P05783 430 aaKnown RBP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 FAM228BP0C875 321 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 CD302Q8IX05 232 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 FAM133AQ8N9E0 248 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 ERMNQ8TAM6 284 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 WHAMMQ8TF30 809 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 TBX3O15119 743 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 GLI1P08151 1106 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 NR2F2P24468 414 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 SLC16A2P36021 539 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 TNNC1P63316 161 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 CDC37Q16543 378 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 KCTD1Q719H9 257 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 CLEC10AQ8IUN9 316 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 EFCAB13Q8IY85 973 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 IQCKQ8N0W5 287 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 C1orf131Q8NDD1 294 aaKnown RBP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 TAF4BQ92750 862 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 GJA10Q969M2 543 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 INPP4AQ96PE3 977 aaPredicted RBP11.79□□□□□ -0.52
CLIP4-204ENST00000404424 ZIM3Q96PE6 472 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 MXD3Q9BW11 206 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 ANO3Q9BYT9 981 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 EHD4Q9H223 541 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 EPB41L5Q9HCM4 733 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
CLIP4-204ENST00000404424 FTCDO95954 541 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 CARSP49589 748 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 MRPS25P82663 173 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 GUCY2DQ02846 1103 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 TTMPQ5BVD1 217 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 ARSHQ5FYA8 562 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 CFAP58Q5T655 872 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 SP8Q8IXZ3 490 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 DCAF4Q8WV16 495 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 PBKQ96KB5 322 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 C8orf37Q96NL8 207 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 FBXL5Q9UKA1 691 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 HDAC9Q9UKV0 1011 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 PCDHA1Q9Y5I3 950 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 GREB1LQ9C091 1923 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 NPHP3-ACAD11A0A0J9YXS1 232 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 SHTN1A0MZ66 631 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L15C9J2P7 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L13C9JLJ4 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L11C9JVI0 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L18D6R9N7 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L22D6RA61 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L17D6RBQ6 530 aa11.78□□□□□ -0.52
CLIP4-204ENST00000404424 USP17L19D6RCP7 530 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms