RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 C6orf50Q9HD87 102 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 KCNH7Q9NS40 1196 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 TET1Q8NFU7 2136 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 DOCK5Q9H7D0 1870 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 GSTTP1A0A1W2PQM5 241 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 NBNO60934 754 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 ARP10275 920 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 MYOGP15173 224 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 IFNAR1P17181 557 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 HOXC8P31273 242 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 SREBF1P36956 1147 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 ARHGAP4P98171 946 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 NTRK3Q16288 839 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 CNKSR3Q6P9H4 555 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 MAFAQ8NHW3 353 aaPredicted RBP15.19■□□□□ 0.02
SDF4-203ENST00000403997 PHOSPHO2Q8TCD6 241 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 GLG1Q92896 1179 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 SDF4Q9BRK5 362 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 COL25A1Q9BXS0 654 aaPredicted RBP15.19■□□□□ 0.02
SDF4-203ENST00000403997 ZMYND12Q9H0C1 365 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
SDF4-203ENST00000403997 PCDHA11Q9Y5I1 949 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 NID2Q14112 1375 aa15.19■□□□□ 0.02
SDF4-203ENST00000403997 ESYT2A0FGR8 921 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 RSPH10B2B2RC85 870 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 BAIAP3O94812 1187 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 CXCL10P02778 98 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 RSPH10BP0C881 870 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 MARK3P27448 753 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 GNA11P29992 359 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 KCNJ6P48051 423 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 MCTP2Q6DN12 878 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 TRAF7Q6Q0C0 670 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 SLC9A7Q96T83 725 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 RNF26Q9BY78 433 aaPredicted RBP15.18■□□□□ 0.02
SDF4-203ENST00000403997 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 PRDM12Q9H4Q4 367 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 AGO4Q9HCK5 861 aaKnown RBP15.18■□□□□ 0.02
SDF4-203ENST00000403997 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 ERAP1Q9NZ08 941 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 SLC9A2Q9UBY0 812 aa15.18■□□□□ 0.02
SDF4-203ENST00000403997 NRCAMQ92823 1304 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 KIF28PB7ZC32 967 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 MEIS1O00470 390 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 CPLX1O14810 134 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 ADAMTS3O15072 1205 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 SSRP1Q08945 709 aaKnown RBP15.17■□□□□ 0.02
SDF4-203ENST00000403997 IKBKEQ14164 716 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 PPP2R2DQ66LE6 453 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 PLA2G4DQ86XP0 818 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 TRIM22Q8IYM9 498 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
SDF4-203ENST00000403997 LMBR1Q8WVP7 490 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 ZNF274Q96GC6 653 aaPredicted RBP15.17■□□□□ 0.02
SDF4-203ENST00000403997 GAS2L1Q99501 681 aaPredicted RBP15.17■□□□□ 0.02
SDF4-203ENST00000403997 NFASCO94856 1347 aa15.17■□□□□ 0.02
SDF4-203ENST00000403997 ABHD14A-ACY1A0A1B0GW23 586 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 LGR5O75473 907 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 ACTR2P61160 394 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 WDR5P61964 334 aaKnown RBP15.16■□□□□ 0.02
SDF4-203ENST00000403997 ADAM17P78536 824 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 STK3Q13188 491 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 MBTPS1Q14703 1052 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 TCTN1Q2MV58 587 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 NIPA1Q7RTP0 329 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 HERC6Q8IVU3 1022 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 AZI2Q9H6S1 392 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 VPS54Q9P1Q0 977 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 EMSYQ7Z589 1322 aa15.16■□□□□ 0.02
SDF4-203ENST00000403997 TANC1Q9C0D5 1861 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 FAM86B1E9PN63 330 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 RBAK-RBAKDNI3L0D1 243 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 DDX39AO00148 427 aaKnown RBP15.15■□□□□ 0.02
SDF4-203ENST00000403997 CAND2O75155 1236 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 CA3P07451 260 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 CYP3A4P08684 503 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 CTSHP09668 335 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 FAM86B2P0C5J1 330 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 NLRP5P59047 1200 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 ITGB3BPQ13352 177 aaPredicted RBP15.15■□□□□ 0.02
SDF4-203ENST00000403997 GRIK4Q16099 956 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 CPLX2Q6PUV4 134 aaKnown RBP15.15■□□□□ 0.02
SDF4-203ENST00000403997 RASGRP4Q8TDF6 673 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 UIMC1Q96RL1 719 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 PCYT2Q99447 389 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 ZBED2Q9BTP6 218 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 KAT6AQ92794 2004 aa15.15■□□□□ 0.02
SDF4-203ENST00000403997 CDH23Q9H251 3354 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 TLL1O43897 1013 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 EFCAB14O75071 495 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 IGFBP4P22692 258 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 STAT5BP51692 787 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 IGBP1P78318 339 aa15.14■□□□□ 0.01
SDF4-203ENST00000403997 DEFB103AP81534 67 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms