RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 ITGB3BPQ13352 177 aaPredicted RBP14.52□□□□□ -0.09
VPREB3-202ENST00000398465 GPR153Q6NV75 609 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 MOXD1Q6UVY6 613 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 KRT25Q7Z3Z0 450 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 TRIM50Q86XT4 487 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 NECAB1Q8N987 351 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 AFAP1L1Q8TED9 768 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 IL23AQ9NPF7 189 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 SH2B1Q9NRF2 756 aaPredicted RBP14.52□□□□□ -0.09
VPREB3-202ENST00000398465 ERAP1Q9NZ08 941 aa14.52□□□□□ -0.09
VPREB3-202ENST00000398465 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 LAMA2P24043 3122 aaKnown RBP14.51□□□□□ -0.09
VPREB3-202ENST00000398465 PTPRSQ13332 1948 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 GSTTP1A0A1W2PQM5 241 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 C17orf102A2RUQ5 167 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 IPO5O00410 1097 aaKnown RBP14.51□□□□□ -0.09
VPREB3-202ENST00000398465 LGR5O75473 907 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 SLC34A2O95436 690 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 PARNO95453 639 aaKnown RBP14.51□□□□□ -0.09
VPREB3-202ENST00000398465 SMIM10L2AP0DMW4 78 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 SMIM10L2BP0DMW5 78 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 ST3GAL1Q11201 340 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 PTK7Q13308 1070 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 SHHQ15465 462 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 C9orf50Q5SZB4 431 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 PPP1R13LQ8WUF5 828 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 LENG9Q96B70 501 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
VPREB3-202ENST00000398465 ZSCAN31Q96LW9 406 aaPredicted RBP14.51□□□□□ -0.09
VPREB3-202ENST00000398465 LLPHQ9BRT6 129 aaKnown RBP14.51□□□□□ -0.09
VPREB3-202ENST00000398465 TCEAL9Q9UHQ7 104 aa14.51□□□□□ -0.09
VPREB3-202ENST00000398465 TET1Q8NFU7 2136 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 NRCAMQ92823 1304 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 ST18O60284 1047 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 CAND2O75155 1236 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 GNAT1P11488 350 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
VPREB3-202ENST00000398465 SLC26A2P50443 739 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 ACTR2P61160 394 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 NONOQ15233 471 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPREB3-202ENST00000398465 PRR16Q569H4 304 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 UTP14CQ5TAP6 766 aaKnown RBP14.5□□□□□ -0.09
VPREB3-202ENST00000398465 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 TBCKQ8TEA7 893 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 DHX38Q92620 1227 aaKnown RBP14.5□□□□□ -0.09
VPREB3-202ENST00000398465 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.5□□□□□ -0.09
VPREB3-202ENST00000398465 ZNF577Q9BSK1 485 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 MTIF3Q9H2K0 278 aaKnown RBP14.5□□□□□ -0.09
VPREB3-202ENST00000398465 SMARCAD1Q9H4L7 1026 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 AZI2Q9H6S1 392 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 BRMS1Q9HCU9 246 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 TBC1D22BQ9NU19 505 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 KCNJ14Q9UNX9 436 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 TELO2Q9Y4R8 837 aa14.5□□□□□ -0.09
VPREB3-202ENST00000398465 SOX1O00570 391 aaPredicted RBP14.49□□□□□ -0.09
VPREB3-202ENST00000398465 ATG7O95352 703 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 IQCF3P0C7M6 154 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 CCL23P55773 120 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 KRT76Q01546 638 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 TMEM240Q5SV17 173 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 RASIP1Q5U651 963 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 ZNF746Q6NUN9 644 aaPredicted RBP14.49□□□□□ -0.09
VPREB3-202ENST00000398465 LRRC8DQ7L1W4 858 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 SMAP1Q8IYB5 467 aaPredicted RBP14.49□□□□□ -0.09
VPREB3-202ENST00000398465 RPUSD2Q8IZ73 545 aaKnown RBP14.49□□□□□ -0.09
VPREB3-202ENST00000398465 GLG1Q92896 1179 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 MBOAT7Q96N66 472 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 TBC1D32Q96NH3 1257 aa14.49□□□□□ -0.09
VPREB3-202ENST00000398465 ARID2Q68CP9 1835 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 CYP3A7-CYP3A51PA0A087WV96 503 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 IGKV6D-21A0A0A0MT36 114 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 CCDC194A0A1B0GVG4 234 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 DHX15O43143 795 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 JAK2O60674 1132 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 CCNE2O96020 404 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 RPLP2P05387 115 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 SELPP16109 830 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 GCFC2P16383 781 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 CYP3A7P24462 503 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 KRT2P35908 639 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 ADAM17P78536 824 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 SMAD3P84022 425 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 TRIM29Q14134 588 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 HIC1Q14526 733 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 TRIM71Q2Q1W2 868 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 Q4G0T1 1027 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 PLPPR4Q7Z2D5 763 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 LMBR1Q8WVP7 490 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 HERVK_113Q902F9 699 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 TNPO1Q92973 898 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 ATP6V0A1Q93050 837 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 SCLYQ96I15 445 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 LRCH3Q96II8 777 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 RIT2Q99578 217 aa14.48□□□□□ -0.09
VPREB3-202ENST00000398465 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
VPREB3-202ENST00000398465 IGSF9BQ9UPX0 1349 aa14.47□□□□□ -0.09
VPREB3-202ENST00000398465 LOXHD1Q8IVV2 1947 aa14.47□□□□□ -0.09
VPREB3-202ENST00000398465 EDIL3O43854 480 aa14.47□□□□□ -0.09
VPREB3-202ENST00000398465 MMP1P03956 469 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms