RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 SPATA31C2B4DYI2 1134 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 CTAGE5O15320 804 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 POLR2DO15514 142 aaKnown RBP15.95■□□□□ 0.14
SKA1-202ENST00000398452 ZNF202O95125 648 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 LETM1O95202 739 aaPredicted RBP15.95■□□□□ 0.14
SKA1-202ENST00000398452 CCT6AP40227 531 aaKnown RBP15.95■□□□□ 0.14
SKA1-202ENST00000398452 STAT6P42226 847 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 JAK3P52333 1124 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 IL17AQ16552 155 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 RRAGBQ5VZM2 374 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 TRMT44Q8IYL2 757 aaKnown RBP15.95■□□□□ 0.14
SKA1-202ENST00000398452 MORC4Q8TE76 937 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 SCFD2Q8WU76 684 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 EPSTI1Q96J88 318 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 TINF2Q9BSI4 451 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 TNMDQ9H2S6 317 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 GOLPH3LQ9H4A5 285 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.95■□□□□ 0.14
SKA1-202ENST00000398452 PTCH2Q9Y6C5 1203 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 PLXNB2O15031 1838 aa15.95■□□□□ 0.14
SKA1-202ENST00000398452 DKC1O60832 514 aaKnown RBP eCLIP15.94■□□□□ 0.14
SKA1-202ENST00000398452 NR1I2O75469 434 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 PSMD10O75832 226 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 GNRH1P01148 92 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 HOXC6P09630 235 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 SFNP31947 248 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 MAMDC4Q6UXC1 1216 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 FBXO16Q8IX29 292 aaPredicted RBP15.94■□□□□ 0.14
SKA1-202ENST00000398452 NEK9Q8TD19 979 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 GJA10Q969M2 543 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 DHX58Q96C10 678 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 TIGD1Q96MW7 591 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 SENP7Q9BQF6 1050 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 ABHD16BQ9H3Z7 469 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 CUEDC2Q9H467 287 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 JPH1Q9HDC5 661 aaPredicted RBP15.94■□□□□ 0.14
SKA1-202ENST00000398452 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
SKA1-202ENST00000398452 HPSEQ9Y251 543 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 TNRC18O15417 2968 aaPredicted RBP15.94■□□□□ 0.14
SKA1-202ENST00000398452 NFASCO94856 1347 aa15.94■□□□□ 0.14
SKA1-202ENST00000398452 FAM237AA0A1B0GTK4 181 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 WDR64B1ANS9 1081 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
SKA1-202ENST00000398452 EPHA7Q15375 998 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 MFSD14CQ5VZR4 134 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 OLFML2BQ68BL8 750 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 ZNF746Q6NUN9 644 aaPredicted RBP15.93■□□□□ 0.14
SKA1-202ENST00000398452 POTEGQ6S5H5 508 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 SMAP1Q8IYB5 467 aaPredicted RBP15.93■□□□□ 0.14
SKA1-202ENST00000398452 FMR1NBQ8N0W7 255 aaPredicted RBP15.93■□□□□ 0.14
SKA1-202ENST00000398452 RDM1Q8NG50 284 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 NPLOC4Q8TAT6 608 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 FGD4Q96M96 766 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 LRRC27Q9C0I9 530 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 DISC1Q9NRI5 854 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 SLC9A2Q9UBY0 812 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 ASTN1O14525 1302 aa15.93■□□□□ 0.14
SKA1-202ENST00000398452 ZSWIM8A7E2V4 1837 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 PP2D1A8MPX8 630 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 NOP56O00567 594 aaKnown RBP15.92■□□□□ 0.14
SKA1-202ENST00000398452 TXNP10599 105 aaKnown RBP15.92■□□□□ 0.14
SKA1-202ENST00000398452 EN2P19622 333 aaPredicted RBP15.92■□□□□ 0.14
SKA1-202ENST00000398452 CDC25AP30304 524 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 KARSQ15046 597 aaKnown RBP15.92■□□□□ 0.14
SKA1-202ENST00000398452 SLC9C1Q4G0N8 1177 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 MIS18BP1Q6P0N0 1132 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 KCTD17Q8N5Z5 321 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 SH3TC2Q8TF17 1288 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 TRIM47Q96LD4 638 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 CCDC43Q96MW1 224 aaKnown RBP15.92■□□□□ 0.14
SKA1-202ENST00000398452 UNC45AQ9H3U1 944 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 MAGEF1Q9HAY2 307 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 VAV3Q9UKW4 847 aa15.92■□□□□ 0.14
SKA1-202ENST00000398452 RGS20O76081 388 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 PSAPP07602 524 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 XRCC5P13010 732 aaKnown RBP15.91■□□□□ 0.14
SKA1-202ENST00000398452 KCNA2P16389 499 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 FLT3LGP49771 235 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 AMPD3Q01432 767 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 SP4Q02446 784 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 ITGB3BPQ13352 177 aaPredicted RBP15.91■□□□□ 0.14
SKA1-202ENST00000398452 IRF5Q13568 498 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 ACVR2BQ13705 512 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 KRBA2Q6ZNG9 492 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 USP49Q70CQ1 688 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 CYFIP1Q7L576 1253 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 DHX37Q8IY37 1157 aaKnown RBP15.91■□□□□ 0.14
SKA1-202ENST00000398452 ENGASEQ8NFI3 743 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 RAET1EQ8TD07 263 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 PLIN2Q99541 437 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 EIF2AK1Q9BQI3 630 aaKnown RBP15.91■□□□□ 0.14
SKA1-202ENST00000398452 POLR3CQ9BUI4 534 aaPredicted RBP15.91■□□□□ 0.14
SKA1-202ENST00000398452 GZF1Q9H116 711 aaPredicted RBP15.91■□□□□ 0.14
SKA1-202ENST00000398452 CLSTN2Q9H4D0 955 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 STK17AQ9UEE5 414 aa15.91■□□□□ 0.14
SKA1-202ENST00000398452 GJD2Q9UKL4 321 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms